AMCG00015532


Basic Information

Item Value
gene id AMCG00015532
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 11012650 ~ 11237850 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015532
CAAACCTGTCCGGGTTTCCCATTCTCTCTGTGAGGACGAGATGGAGGCTGTTGAGCAGAgaaaaatcaaaatacacaagTGCCTGCAGGAACTGGGAATTCCTTGTGATTCGGCTGATGTGCCTCCGATCGCAGTGCTGGGCTCTGGGGGGGGTCTGCGGGCCATGGTGGCTCTGATGGGGACGCTGAGTGAACTGGGGGCTCAGAACCTGCTGGACTCGATCATGTACCTGTGTGGAGTGTCAGGATCCACCATGTGTATGTCATCTTTATACAAGGAGAAGGACTGGTCCCCTACAGTGAAGAAGAGAGAGCATGAGATGGTGGAAACACTCACAACAGGAAAAGTTccacttttgaaaatgttggagAGAATCTTGGAGGCAGTGGATGACGTGAATTACTCTCTGACAGATCTGTGGGctggcacatttatttataacatgttGAGAAAGATAAACAACCTAACTTGTCACACTGGTGACACTGACATGCAATTGATTTTCCAGGAGGACAAACAGCATCTCTCCAGTTACACAGATGAGACCATGGTGAATCCCTACCCAATCTTTGCAGTCGTGGACAAGTGGAGACTGGACCACAAAGAAGAACATGACAAAGGACTGTGGTTTGAGATCACACGCCATGAAGCTGGGTACCCTGGATACGGTGCATTTGTAGACTCATCAGTGTTTGGAAGTCGCTTCAAAGCAGGACAAATAACTGAACGGAAAAAGGAGATGGACATGCTGTACCTGCAAGGGGAGCGCTGTGACTGCAAGCACTGCACTAAAATCTTGCTTTTGCTTGAGCTACATAAGCCCTTTGATTCTGGGAAAGACTGCAAACCCATTCTCCACTCCTTAATGGCCACCCAGGAAGAGCTCCCCAAAGACCTGGTCCAAGATGAGAAGATTTACCTGATTGACGCTGGACTGTCCAATAACTGTGCTTATCCACTGGTCCTGAGGAAGGAGAGACAAGTGCAGCTCATCCTGTCCTTCGACTTCAGCGCTGGAGACCCATTCCTGACAGTCCATCAAGCAGCAGAGTACTGTAAGAAGAACAATATTCCCTTCCCAGACATCCCAacggtgagtgaggaggaggaggcctgTCCCTCAGACTGCTACATCTACAGCGGGGAGAACAAGCCCACTGTGATGCACTTCCCTCTCTTCAACAAGGCCAACTGTGGAGATGCAGAAAAGATCAAGCAAATGCAGGAAACTTATAACACCACTAAAATGTCCTACAACAAAGTTCAGATACAAGATCTCTTAGCATATTCTAAGAGCAACATTCGCAACAACCGAGACAAGATCGTCACTGAGATAAAGAAGGCTGTGGAGGCCGAACggaagaagaaacagaaa
>TU122884
ATTCAGCCACACCCACTCAATGGATATTATAAGGTGCAACACTGGGAATGTCAAGCCCACTGAAGCAAGGCAACAGGAGAAGCTCTTGACTGACACTGGATGAAATAGCCACCCAGAAGgagaaaatGGCAAGTCTTACATCTAGTAGCAAACCTGTCCGAGTTTCCAAATCTCTCTGCaaggaggagatggaggctgTTGAGCAGAgaaaaatcaaaatacacaagTGCCTGCAGGAACTGGGAATTCCCTGTGAATTGGCTGATGTGCCTCCGATCGCAGTGCTGGGCTCTGGGGGGGGTCTGCGGGCCATGGTGGCTCTGATGGGGACGCTGAGTGAACTGGGGGCTCAGAACCTGCTGGACTCGATCATGTACCTGTGTGGAGTGTCAGGATCCACCATGTGTATGTCATCTTTATACAAGG

Function

GO: NA

KEGG:

id description
K16342 PLA2G4, CPLA2; cytosolic phospholipase A2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015532 True 1375 mRNA 0.48 9 11012650 11024613
TU122884 False 426 TUCP 0.51 5 11023169 11237850

Neighbor

gene id symbol gene type direction distance location
AMCG00015533 NA coding downstream 5275 10997549 ~ 11007375 (-)
AMCG00015534 NA coding downstream 17765 10989882 ~ 10994885 (-)
AMCG00015530 NA coding downstream 27440 10977415 ~ 10985210 (-)
AMCG00015531 actn3,LOC101158802 coding downstream 71155 10924861 ~ 10941495 (-)
AMCG00015527 NA coding downstream 172798 10817679 ~ 10839852 (-)
AMCG00015541 NA coding upstream 33689 11271539 ~ 11322500 (-)
AMCG00015556 NA coding upstream 1225206 12463056 ~ 12469988 (-)
AMCG00015560 NA coding upstream 1243872 12481722 ~ 12507107 (-)
AMCG00015562 NA coding upstream 1335613 12573463 ~ 12574052 (-)
AMCG00015561 NA coding upstream 1385408 12623258 ~ 12640668 (-)
G98399 NA non-coding downstream 303898 10708421 ~ 10708752 (-)
G98314 NA non-coding downstream 519544 10489579 ~ 10493106 (-)
G98216 NA non-coding downstream 790125 10173101 ~ 10222525 (-)
G98211 NA non-coding downstream 847253 10107233 ~ 10165397 (-)
G98163 NA non-coding downstream 936757 10026114 ~ 10075893 (-)
G98591 NA non-coding upstream 309785 11547635 ~ 11547875 (-)
G98648 NA non-coding upstream 1208148 12445998 ~ 12446953 (-)
G98649 NA non-coding upstream 1209738 12447588 ~ 12447829 (-)
G98650 NA non-coding upstream 1211446 12449296 ~ 12449821 (-)
G98651 pcnx3,LOC107560657,LOC107715400 non-coding upstream 1214512 12452362 ~ 12452577 (-)
AMCG00015524 NA other downstream 163229 10843685 ~ 10849421 (-)
AMCG00015519 zmp:0000001168,sipa1,LOC108430456 other downstream 308255 10655185 ~ 10704395 (-)
AMCG00015501 NA other downstream 627271 10378285 ~ 10385379 (-)
G98269 taf6l other downstream 671782 10288026 ~ 10340868 (-)
AMCG00015493 zbtb3,LOC107602571 other downstream 813996 10195564 ~ 10198654 (-)
AMCG00015540 NA other upstream 94813 11332663 ~ 11345490 (-)
G98543 NA other upstream 115933 11353783 ~ 11386199 (-)
G98546 NA other upstream 176517 11414367 ~ 11416662 (-)
AMCG00015557 map3k11,LOC101463885,LOC102206973,LOC102778058,LOC100707946 other upstream 1161883 12399733 ~ 12430648 (-)
AMCG00015598 timm10,LOC107746912,LOC107674252,LOC107556822 other upstream 2220277 13458127 ~ 13468822 (-)

Expression


Co-expression Network