Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00015534 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 10989882 ~ 10994885 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| K04569 | CCS; copper chaperone for superoxide dismutase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00015534 | True | 610 | mRNA | 0.65 | 7 | 10989882 | 10994885 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015530 | NA | coding | downstream | 4672 | 10977415 ~ 10985210 (-) |
| AMCG00015531 | actn3,LOC101158802 | coding | downstream | 48387 | 10924861 ~ 10941495 (-) |
| AMCG00015527 | NA | coding | downstream | 150030 | 10817679 ~ 10839852 (-) |
| AMCG00015525 | NA | coding | downstream | 173586 | 10810529 ~ 10816296 (-) |
| AMCG00015523 | NA | coding | downstream | 186355 | 10798420 ~ 10803527 (-) |
| AMCG00015533 | NA | coding | upstream | 2664 | 10997549 ~ 11007375 (-) |
| AMCG00015536 | NA | coding | upstream | 184207 | 11179092 ~ 11183890 (-) |
| AMCG00015541 | NA | coding | upstream | 276654 | 11271539 ~ 11322500 (-) |
| AMCG00015556 | NA | coding | upstream | 1468171 | 12463056 ~ 12469988 (-) |
| AMCG00015560 | NA | coding | upstream | 1486837 | 12481722 ~ 12507107 (-) |
| G98399 | NA | non-coding | downstream | 281130 | 10708421 ~ 10708752 (-) |
| G98314 | NA | non-coding | downstream | 496776 | 10489579 ~ 10493106 (-) |
| G98216 | NA | non-coding | downstream | 767357 | 10173101 ~ 10222525 (-) |
| G98211 | NA | non-coding | downstream | 824485 | 10107233 ~ 10165397 (-) |
| G98163 | NA | non-coding | downstream | 913989 | 10026114 ~ 10075893 (-) |
| G98510 | NA | non-coding | upstream | 148633 | 11143518 ~ 11149864 (-) |
| G98591 | NA | non-coding | upstream | 552750 | 11547635 ~ 11547875 (-) |
| G98648 | NA | non-coding | upstream | 1451113 | 12445998 ~ 12446953 (-) |
| G98649 | NA | non-coding | upstream | 1452703 | 12447588 ~ 12447829 (-) |
| G98650 | NA | non-coding | upstream | 1454411 | 12449296 ~ 12449821 (-) |
| AMCG00015524 | NA | other | downstream | 140461 | 10843685 ~ 10849421 (-) |
| AMCG00015519 | zmp:0000001168,sipa1,LOC108430456 | other | downstream | 285487 | 10655185 ~ 10704395 (-) |
| AMCG00015501 | NA | other | downstream | 604503 | 10378285 ~ 10385379 (-) |
| G98269 | taf6l | other | downstream | 649014 | 10288026 ~ 10340868 (-) |
| AMCG00015493 | zbtb3,LOC107602571 | other | downstream | 791228 | 10195564 ~ 10198654 (-) |
| AMCG00015532 | NA | other | upstream | 17765 | 11012650 ~ 11237850 (-) |
| G98502 | NA | other | upstream | 19740 | 11014625 ~ 11245562 (-) |
| AMCG00015535 | NA | other | upstream | 190975 | 11185860 ~ 11261168 (-) |
| AMCG00015540 | NA | other | upstream | 337778 | 11332663 ~ 11345490 (-) |
| G98543 | NA | other | upstream | 358898 | 11353783 ~ 11386199 (-) |
