AMCG00015541


Basic Information

Item Value
gene id AMCG00015541
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 11271539 ~ 11322500 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015541
ATGCCGTCCCAGAGTGGCCGGGAGGACCAGCAGGTGGTGGGCTTTGGGGCCTACAAGGCCCAGACCTGGCAGGAGCTCTACGAGGCCACAGACAAGGAGAGGAGAGGGTATGTGAGATGGATAAGGAGGCAGACTCCCCAGCCTGGAATGCAGATGGCCAAATTCCTGGCATACATCCTGCGGTGGGACAGGGAGTCACAGGCTCAGAagccagcagcacagcctgccTCCTCCCAGCCCACACCCTCGGTGCCTGCGCCCTGCCAGCCTCCCAGGATGAGTGCCTCACAGTCGGCTCCCACCCTCTCCTCGTCTGCCACCAAGTCCAGAGCTCCAGTGGCAAAAGGTTCATTTTGTGGAACTGTGTCCAGGAAGGAGCGCCTGTCGCCGGCCTTCAGCGACGATGCGCTCACTGACACTGAACTGCTGGCAGCTGTGGAGGACATGGCCCCCCCGCGTAAGTACAGCAAGCAGCAGAAGGGACAGGAGAGGGCTGTTTTCCTGCAGGGGGTGGAGGGTCCCACTGCCAACATGGAGGCCTCACTGCCCCTCCCAGCACCGCGTCCTCTCCTACTGAAGCCCTTGACCTATGGTCACCTGCCGCATTTGTACCACTGCCCCCCAACACCATCGGTCAGGCCGACAGAGGGGGtgcCTGCTATCACCCTGCGGTACCAGAAGAGAAAAGCCGAGGAGGAGGCATCTGGcctgaggaagaggaagtacAGCAGTCGAAGTGAGCTGGATAAATCTCTCCAAGTGAGTGGCGTGCTTTCTCTAGAAGTGACAAGACgcTCCCTGGCAGACCAGATAAAAAAGCACAGCCTCATAGTGACAGACCACATGAAAGAGCACGGTCTAGCAGTGCACAACAGCCTACTGTCACAGCACAGCTTAAACAGTCAGGTTCATAAGAAGCCTGGTCCCAAGCAGATGCCTTCTATACTATTTGGCTCCAGGGACTGTGGCTTCAGAGTAGAGCAACAACTACTTCTAGCCTTTTCCGAGTTACACCATCAAGCCACAGAGTACTGTAAGAAGAACAACATTCCTTTCCCAGACATCCCAgcggtgagtgaggaggagaaggcCTGTCCCTCAGACTGCTACATCTACAGCGGGGATGACACGCCCACTGTGATGCACTTCCCTCTCTTCAACAAGGCCAACTGTGGAGtactATTTATGGAGATATTCCTCAGAAAAGTGAAGAGATATGGAACTGTTATGTGGGATGTTTATTCTAAACCCACTCCGTCAAACCTAAAGGAGGTCcttgtccttttttttatttgcctgtGTTTTGCATTGACAGCTGGGGGGCTACTTTACTCATGgatgatttttaaattacattacgAAGAACTCCCATCTAGAATtgtagctggctgtgtgtgctTCAGTATCGTTCTGCTTATCTTCCTGGTCCATCCGGTTCGATGCATGTTCACTATCATGATACCCACCCTGGGCACCAAGCAAGGCCTGAAGATTATCATTTCGGCTGCTCTGGTGTTTTCGATCACTAGATGTGCCGCACATGTGGCCTTAAATATGGACATGATTGCTGACATAGTCAAATGTTCCACTCTGCAACCCATTGAAAAAATTCTGAATTCAACGACCCTAGTGAATTCTGCCCTTGATAACATTGTCAATGTTCTCAATAGAGTCCCAGCCATCATAAAGAAGGAGAAGCACTTAAACTTGGCCCAGAACTTAGATGTCTCCCAGCTGACACGTACCTTGGTGGAGCTTTCCACCAATGTCAGAAGAGACTTCTCTGTGATGGAAAACTTTCTGTGGAAAGTTTCAAGTGTCGTGGACAAGATCATTGGTGCGATTTTCATTCTCTATCTGGTTGGAGGTTCAGCTTGGTATTTAGCGAGCTACCTCACAGACCTGAAATTTGACAATATTTATATCTCTCAGAGCCTGTTGGAGCTAGCTAAGGCACGAGGTCAAACTGATATCCCATCATATGATAAAATAAAGTTGGTGAGAACAACTGGCTGGAAAATGACTCGGCAGGAGATGAAGAGAACCTTGTGGGGTATCATGATGCTAGTGCCTTATGTATTGATATCTGTGATGTTAATAGGAATGGACTATTTCATTTACTTCGTCTTGGAAGAAACTTTGAGCTGGACAGCAGGCATTCAAGAATCAATCTTCAGCTTTGAAACTGACCTTGAATTGAAGTATCACATTGATATAGTGGATGCATTACAGCCTGTGGCCGATGTTTTTGGTGCTAAGATAAACATCCAAACATACAAGGACAAAAAAGAGTACAGAATCTCTCAGATGGATACCTTCTGTGTGGAGAAATCCATTTTGCACAGTTACACTGTAGGCTGTCGCACTGCAGACAATTACACTGAAGTTTTGTACCCTGTATCAGTAACAGTGGGGTTCCTGTATCTCATTGCCTTCATCATGGTACTGGGGCAGGTGTATGCCAGACGACTTTGCCGCAAAATCGCGGCTTCCTTTTTCAGGAAGCAAGAGGAGGAGCGTGTTGCCTACCTGTTTGAGGAGATTGTGgACTTTGGCAGTCTTCGGCTGGCTGTTGAGACCCAACCTGGTATCAAAGGACAACTCCTGGGTTTATCCCAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015541 True 2622 mRNA 0.50 14 11271539 11322500

Neighbor

gene id symbol gene type direction distance location
AMCG00015536 NA coding downstream 87649 11179092 ~ 11183890 (-)
AMCG00015533 NA coding downstream 264164 10997549 ~ 11007375 (-)
AMCG00015534 NA coding downstream 276654 10989882 ~ 10994885 (-)
AMCG00015530 NA coding downstream 286329 10977415 ~ 10985210 (-)
AMCG00015531 actn3,LOC101158802 coding downstream 330044 10924861 ~ 10941495 (-)
AMCG00015556 NA coding upstream 1140556 12463056 ~ 12469988 (-)
AMCG00015560 NA coding upstream 1159222 12481722 ~ 12507107 (-)
AMCG00015562 NA coding upstream 1250963 12573463 ~ 12574052 (-)
AMCG00015561 NA coding upstream 1300758 12623258 ~ 12640668 (-)
AMCG00015568 NA coding upstream 1441412 12763912 ~ 12779914 (-)
G98510 NA non-coding downstream 121675 11143518 ~ 11149864 (-)
G98399 NA non-coding downstream 562787 10708421 ~ 10708752 (-)
G98314 NA non-coding downstream 778433 10489579 ~ 10493106 (-)
G98216 NA non-coding downstream 1049014 10173101 ~ 10222525 (-)
G98211 NA non-coding downstream 1106142 10107233 ~ 10165397 (-)
G98591 NA non-coding upstream 225135 11547635 ~ 11547875 (-)
G98648 NA non-coding upstream 1123498 12445998 ~ 12446953 (-)
G98649 NA non-coding upstream 1125088 12447588 ~ 12447829 (-)
G98650 NA non-coding upstream 1126796 12449296 ~ 12449821 (-)
G98651 pcnx3,LOC107560657,LOC107715400 non-coding upstream 1129862 12452362 ~ 12452577 (-)
AMCG00015535 NA other downstream 10371 11185860 ~ 11261168 (-)
G98502 NA other downstream 25977 11014625 ~ 11245562 (-)
AMCG00015532 NA other downstream 33689 11012650 ~ 11237850 (-)
AMCG00015524 NA other downstream 422118 10843685 ~ 10849421 (-)
AMCG00015519 zmp:0000001168,sipa1,LOC108430456 other downstream 567144 10655185 ~ 10704395 (-)
AMCG00015540 NA other upstream 10163 11332663 ~ 11345490 (-)
G98543 NA other upstream 31283 11353783 ~ 11386199 (-)
G98546 NA other upstream 91867 11414367 ~ 11416662 (-)
AMCG00015557 map3k11,LOC101463885,LOC102206973,LOC102778058,LOC100707946 other upstream 1077233 12399733 ~ 12430648 (-)
AMCG00015598 timm10,LOC107746912,LOC107674252,LOC107556822 other upstream 2135627 13458127 ~ 13468822 (-)

Expression


Co-expression Network