AMCG00015561


Basic Information

Item Value
gene id AMCG00015561
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 12623258 ~ 12640668 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015561
ATGGTGGCTCTGATGGGAACACTGAGTGAGATGAAGACTCAGAACCTGCTGGACTCCATCCTGTACCTGTGTGGAGTGTCAGGATCCACCTGGTGTATGTCAGCTTTATACAAGGATAAGGACTGGTCCTCTCAAGTTgagaagagagaagaagagaTGGTGGAAACGCTTACAACTGGAACAGTTACATTTCGGAACAAGTGGAAGAGAGCCTTGGAGTCCGTGGATGATGAGAACTGTTCTCTGACAGACATCTGGGCTGGGATTATTGTTCATGATATTGTGAAAAAGAAGTCCATCTCATTCTGCCAGTGCAACAAGATCCAGGCACACCTATCCCCAGTTACTCCTTCTCATCAGAAAACCACAGgAGTGTGGTTTGAGATCACATGCCATGAGGCAGGGTACCCCGGTTACGGTGCCTTTGTAGAAACGTCAGTGTTTGGAAGTCGGTTCCATGCAGGAGAAATTACAGAATGGAAAGAGGAGATGGACATGCTGTACCTGCAAGgaCTATGTGGCAGTGCCATAGGAGACATGAGAGAGAACATAATTGACATCATAGAGTGGATAACCCATCACATTTTTAGTGGATCAGAAGTGTCAAAGGACATAACTTCAAGCTCTCAGAAAGgaGATCGCTGTGGCTGCATGCACTGCACTAAAATCCTGTTACTGTTTGACCTACAGAAGGCCTTTTATTGTGACGAAGACTGTAAACCCATTCTCCAAAAAATAATGGCCACCCAGGAGGttcaCCAAAGAATTGGAGACTTTGGTTATTTCGGTTCTTTCAGTTCTTCTGATCTTTCACTGACTCAGAAGACACAGTTCTGGTGGGCAGTGGGCACCTGCACCATTGATAGGCTGATAACCCCCGAGTGCTGCACCCTGCTGCTCCTACACCTGTCTGTTCTGATCAACCCCTCTCCAGAGAGCAGACTCCCCAGTGACCTGGTACAGGATGAGAAGATTTACCTGGTAGACGCTGGACTGTCCATTAACTGTGCTTACCCATTGGTCCTGAGGCCAGAGAGACAAGTGCAGCTCATCCTGTCCTTTGACTTCAGCGCTGGAGACCCATTCAAGACAGTCCAGAAAGCAGCAGAGTACTGTAAGAAGAACAGCATTCCCTTCCCAGACATCCCAGCGGTGAGTGAGAAGGAGAAGGCCTGTCCCTCAGACTGCTACATCTACAGAGGGAAGAACACCCCCACTGTGATGCACTTCCCTCTCTTCAACAAGGTTAACTGTGGAGATGCAGAAGAGATCAAAGCTGCGAGAAGTACTTTCCATACGAATAAAATGTCCTACAGCAAAGAGGAGATACAAGCTCTCTTAGCAGCCTCCAAGAGCAATGTCCGCAAGAACCAGGATATTATTATTGCGGAGATAAAAAGCACTGTAGAGTCAGTACGgaagaagaaactgaaataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015561 True 1437 mRNA 0.47 12 12623258 12640668

Neighbor

gene id symbol gene type direction distance location
AMCG00015562 NA coding downstream 49206 12573463 ~ 12574052 (-)
AMCG00015560 NA coding downstream 116151 12481722 ~ 12507107 (-)
AMCG00015556 NA coding downstream 153270 12463056 ~ 12469988 (-)
AMCG00015541 NA coding downstream 1300758 11271539 ~ 11322500 (-)
AMCG00015536 NA coding downstream 1439368 11179092 ~ 11183890 (-)
AMCG00015568 NA coding upstream 123244 12763912 ~ 12779914 (-)
AMCG00015570 NA coding upstream 139270 12779938 ~ 12780493 (-)
AMCG00015569 NA coding upstream 140079 12780747 ~ 12780971 (-)
AMCG00015574 NA coding upstream 297997 12938665 ~ 12944741 (-)
AMCG00015575 NA coding upstream 327212 12967880 ~ 12982396 (-)
G98671 NA non-coding downstream 99183 12523793 ~ 12524075 (-)
G98662 NA non-coding downstream 152818 12470098 ~ 12470440 (-)
G98658 NA non-coding downstream 165185 12457626 ~ 12458073 (-)
G98657 pcnx3,LOC108279110 non-coding downstream 167052 12455930 ~ 12456206 (-)
G98656 pcnx3,LOC106602984,LOC107715400 non-coding downstream 168403 12454625 ~ 12454855 (-)
G98836 NA non-coding upstream 608168 13248836 ~ 13249283 (-)
G98844 NA non-coding upstream 620343 13261011 ~ 13262227 (-)
G98953 NA non-coding upstream 689224 13329892 ~ 13335929 (-)
G98950 NA non-coding upstream 755979 13396647 ~ 13416500 (-)
G98973 NA non-coding upstream 824190 13464858 ~ 13519520 (-)
AMCG00015557 map3k11,LOC101463885,LOC102206973,LOC102778058,LOC100707946 other downstream 192610 12399733 ~ 12430648 (-)
G98546 NA other downstream 1206596 11414367 ~ 11416662 (-)
G98543 NA other downstream 1237059 11353783 ~ 11386199 (-)
AMCG00015540 NA other downstream 1277768 11332663 ~ 11345490 (-)
AMCG00015535 NA other downstream 1362090 11185860 ~ 11261168 (-)
AMCG00015598 timm10,LOC107746912,LOC107674252,LOC107556822 other upstream 817459 13458127 ~ 13468822 (-)
AMCG00015606 NA other upstream 1030647 13671315 ~ 13845677 (-)
AMCG00015612 zdhhc5a,zdhhc5 other upstream 1193849 13834517 ~ 13864738 (-)
AMCG00015628 NA other upstream 1654300 14294968 ~ 14336329 (-)
G99213 NA other upstream 1807043 14447711 ~ 14456695 (-)

Expression


Co-expression Network