AMCG00015568


Basic Information

Item Value
gene id AMCG00015568
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 12763912 ~ 12779914 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015568
ATGCATCTGGAAGGAGGGCTTACCCTCATGGTCCGGCAAGGAGATATCACCAAGGAGAAGGTAGATGCCATTGTGAACGCCGCAAATGAGAACTTAGACCACATTGGTGGAGTGGCTATGGTCATCAGCCAAGCCGGGGGCCCGTTGTTACAGAGCGAGTGCAGAGAATGGGTGAAGAGAAGGGGGCAGGTGCCAGCTGGCAAGGCAGTGAAGACAACCGCTGGCTTCCTGCCCTGCAAGATGGTCATTCACGCAGTGGGGCCCAGATGGGAGGGTGAACAAGGAGTGGATAAGGTCCGAGGCCTCCTGGAGTGTGCTGTCAGGGAGTCCCTGGAGATAGCCGAGCAGGAAGGCTGCCAATCCCTGGCCATTCCCTGCCTGAGCTCGGGGTTGTATAGTGTGCCTGTGCACATTTCTGCTCAGACCATTGTGGAGACGGTGAGGAATTTCAGCAGGGTGCCTCGTACCCTCCAGTCTGTCACCCTGTTGGATGTTCGCAGGGACACCGTCAGTGCATTTCAGACTGCCTGTGTGTCAGGGCTGTGGAAGGATGACACAACCTTAAGGTCACAAGGAAACCAAGACTACATGTTGTCTTCAAGACCCCATGATACTTTAGCACCAGATGTCTGTAGCAGATTGGAAGTCGTGCTGGGAAACCTTGAAGACCAACAGGTGGATATTTTGGTGGCCCATATGATCAATACAGAACTGCGTTCCACCAAAGTTGGAAAATCTTTTGTTCAGAAAGGAGGGGACCAGCTCAAGTCCAGGTTTGCTCACACAGTTCAAGGGAAACAAATTCTGCCTGGGGATGTGATAGAAATGAATGGGGTCACTGGTCTGGCCTGCAAACAGATCTGCTTCATTCAGTGTATCAGGTGGGATGGGCTACATCAAGGAAAGGCTGTGGAGGCGCTCCGCAAAGGGTTGAAGAGAGTCCTGGAGGTCTGCGAGAATCAGGCCCTGAACTCTATTTCCTTTCCAGTGATGGGTCCAGGAATCGCTCTTGGTTTCCCTCATGATGAAGCTGTCAGGCTTCTGGCGGATGAAATCGCTCAATTTGAACAGACATGGCTGACTAAACATGTGTCCACAATACGCATTGTCATCAAACCAAGTGAACAGGAGTCTGCAGAAGCAATCCAAGATGCCCAGGAAGGACTTTTCTTAGATTTGGCAAACCAGTCAGGACCATCATCCTTCTTCCACTCCATCACCTCGGACCTTGATGAGATCACTGTGGCTGTGGGCAGGGTGCGGGTGCAGTTCGTGTTTGGCAACATCTTAAATGAAACCACAGATGTTATCGTCAACTCCACTGACTTCTCAACCAACCACGCAGGTGTGTGCAAGGATATTCTGTCTGTAGCAGGAGTGACTGTCCAAAGGGAGGTGGAATCAGCCCAGTCCAAGTTTCAGATGAAGCATGCTGTGCAAGAAACAGCTGTTCCTGCCTACACAGAAAATCCAACAATTAATCTCTGTGGACTGTTATCCGCCACACAGAGACCTTCCACGACAGCTGTCTTTGAAATCATTGGGCAGAAGGGAGACAATCTGAGAAAAGCTAAGGAGAGAGTGCAGTCCTTGTTTGACAGCCAAGTTGACAAACAAGAATTTCCCAAAGAGGACCTGTCCAGACTTACTGAGGAGGACATCCAAACCATTGTGCAAAGTGCTTCTAGCCTAGATGTGCAATTGGAACAGAGATCTGATGgaacagtcattttaaaagggCTGAAACCCAGAGTCAATTACTTGTTGCAACTGTTTCAGAGGACTCTTCACGAAGGCCTGCTGAGGGAGATGACAGTGAAGGAGCAGAATTGTATGTGGTCCAGAGTTATGTGGTGCCTTGAGAAGAATGGAGATTGGGAACACTTCCCCAGAGAGGCCAACTACCTGCTGGAGACAGGGGGGTCATCAGCAGTTATGGATGCAAGTGGGGGAAAACTCTGCATAGATCTTCAGAAAATGGAGGCCACCAATGAGAGAACGGCTCAGGCCATGAGAATAAAAAGGCTGGAGAGCCAGTCAGTCCCACTGTACTGGGATAATATGGGCAATAGAGAGACCTTAAAGAAAGTGGAACTACAGCCCAGCTCTTCAGAGTACCAAAGAGTGAAAAATGGCTTTCTGAAGACGGCAGgcaaaactgtaataaaaAGCTATGAAGTGCAGAGAAAGCGGTTTGAGGATAAGAACGGTGTAAGTGCTGTCTTTGAGAAGAGTCTGTACCACGGCACCACACAGGAGGCCTGCAGTTCCATTGAGAAGGATGGCTTCAACAGGAGATTTGCTGGACAGAATGggACGTATTACGGCCTCGGAGTTTACTTTGCAGTACATGCCAGCTACTCCGTCCATGAGAGTTATGCGAAACCGGATGCCGATGGCCTGCAGCACATGTATGTAGTCCGGgtgctgactggacactacaccAAGGGGGAGGAGGGCATGAAAGTTCCCCCTCCACGCACCCCTGCAGACATAGATGACCGCTATGACAGCCTGGTAGACAACCTACTGAAACCAAACATGTTCATTGTTTTCCACGACAGCCAGGCTTACCCAGACTACCTTATCACATTCAAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015568 True 2601 mRNA 0.50 10 12763912 12779914

Neighbor

gene id symbol gene type direction distance location
AMCG00015561 NA coding downstream 123244 12623258 ~ 12640668 (-)
AMCG00015562 NA coding downstream 189860 12573463 ~ 12574052 (-)
AMCG00015560 NA coding downstream 256805 12481722 ~ 12507107 (-)
AMCG00015556 NA coding downstream 293924 12463056 ~ 12469988 (-)
AMCG00015541 NA coding downstream 1441412 11271539 ~ 11322500 (-)
AMCG00015570 NA coding upstream 24 12779938 ~ 12780493 (-)
AMCG00015569 NA coding upstream 833 12780747 ~ 12780971 (-)
AMCG00015574 NA coding upstream 158751 12938665 ~ 12944741 (-)
AMCG00015575 NA coding upstream 187966 12967880 ~ 12982396 (-)
AMCG00015577 tmem17,LOC107753710,LOC107598907 coding upstream 252127 13032041 ~ 13036515 (-)
G98671 NA non-coding downstream 239837 12523793 ~ 12524075 (-)
G98662 NA non-coding downstream 293472 12470098 ~ 12470440 (-)
G98658 NA non-coding downstream 305839 12457626 ~ 12458073 (-)
G98657 pcnx3,LOC108279110 non-coding downstream 307706 12455930 ~ 12456206 (-)
G98656 pcnx3,LOC106602984,LOC107715400 non-coding downstream 309057 12454625 ~ 12454855 (-)
G98836 NA non-coding upstream 468922 13248836 ~ 13249283 (-)
G98844 NA non-coding upstream 481097 13261011 ~ 13262227 (-)
G98953 NA non-coding upstream 549978 13329892 ~ 13335929 (-)
G98950 NA non-coding upstream 616733 13396647 ~ 13416500 (-)
G98973 NA non-coding upstream 684944 13464858 ~ 13519520 (-)
AMCG00015557 map3k11,LOC101463885,LOC102206973,LOC102778058,LOC100707946 other downstream 333264 12399733 ~ 12430648 (-)
G98546 NA other downstream 1347250 11414367 ~ 11416662 (-)
G98543 NA other downstream 1377713 11353783 ~ 11386199 (-)
AMCG00015540 NA other downstream 1418422 11332663 ~ 11345490 (-)
AMCG00015535 NA other downstream 1502744 11185860 ~ 11261168 (-)
AMCG00015598 timm10,LOC107746912,LOC107674252,LOC107556822 other upstream 678213 13458127 ~ 13468822 (-)
AMCG00015606 NA other upstream 891401 13671315 ~ 13845677 (-)
AMCG00015612 zdhhc5a,zdhhc5 other upstream 1054603 13834517 ~ 13864738 (-)
AMCG00015628 NA other upstream 1515054 14294968 ~ 14336329 (-)
G99213 NA other upstream 1667797 14447711 ~ 14456695 (-)

Expression


Co-expression Network