Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00015570 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 12779938 ~ 12780493 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00015570 | True | 444 | mRNA | 0.47 | 2 | 12779938 | 12780493 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015568 | NA | coding | downstream | 24 | 12763912 ~ 12779914 (-) |
| AMCG00015561 | NA | coding | downstream | 139270 | 12623258 ~ 12640668 (-) |
| AMCG00015562 | NA | coding | downstream | 205886 | 12573463 ~ 12574052 (-) |
| AMCG00015560 | NA | coding | downstream | 272831 | 12481722 ~ 12507107 (-) |
| AMCG00015556 | NA | coding | downstream | 309950 | 12463056 ~ 12469988 (-) |
| AMCG00015569 | NA | coding | upstream | 254 | 12780747 ~ 12780971 (-) |
| AMCG00015574 | NA | coding | upstream | 158172 | 12938665 ~ 12944741 (-) |
| AMCG00015575 | NA | coding | upstream | 187387 | 12967880 ~ 12982396 (-) |
| AMCG00015577 | tmem17,LOC107753710,LOC107598907 | coding | upstream | 251548 | 13032041 ~ 13036515 (-) |
| AMCG00015578 | NA | coding | upstream | 259055 | 13039548 ~ 13055038 (-) |
| G98671 | NA | non-coding | downstream | 255863 | 12523793 ~ 12524075 (-) |
| G98662 | NA | non-coding | downstream | 309498 | 12470098 ~ 12470440 (-) |
| G98658 | NA | non-coding | downstream | 321865 | 12457626 ~ 12458073 (-) |
| G98657 | pcnx3,LOC108279110 | non-coding | downstream | 323732 | 12455930 ~ 12456206 (-) |
| G98656 | pcnx3,LOC106602984,LOC107715400 | non-coding | downstream | 325083 | 12454625 ~ 12454855 (-) |
| G98836 | NA | non-coding | upstream | 468343 | 13248836 ~ 13249283 (-) |
| G98844 | NA | non-coding | upstream | 480518 | 13261011 ~ 13262227 (-) |
| G98953 | NA | non-coding | upstream | 549399 | 13329892 ~ 13335929 (-) |
| G98950 | NA | non-coding | upstream | 616154 | 13396647 ~ 13416500 (-) |
| G98973 | NA | non-coding | upstream | 684365 | 13464858 ~ 13519520 (-) |
| AMCG00015557 | map3k11,LOC101463885,LOC102206973,LOC102778058,LOC100707946 | other | downstream | 349290 | 12399733 ~ 12430648 (-) |
| G98546 | NA | other | downstream | 1363276 | 11414367 ~ 11416662 (-) |
| G98543 | NA | other | downstream | 1393739 | 11353783 ~ 11386199 (-) |
| AMCG00015540 | NA | other | downstream | 1434448 | 11332663 ~ 11345490 (-) |
| AMCG00015535 | NA | other | downstream | 1518770 | 11185860 ~ 11261168 (-) |
| AMCG00015598 | timm10,LOC107746912,LOC107674252,LOC107556822 | other | upstream | 677634 | 13458127 ~ 13468822 (-) |
| AMCG00015606 | NA | other | upstream | 890822 | 13671315 ~ 13845677 (-) |
| AMCG00015612 | zdhhc5a,zdhhc5 | other | upstream | 1054024 | 13834517 ~ 13864738 (-) |
| AMCG00015628 | NA | other | upstream | 1514475 | 14294968 ~ 14336329 (-) |
| G99213 | NA | other | upstream | 1667218 | 14447711 ~ 14456695 (-) |
