AMCG00015592 (unc93b1)


Basic Information

Item Value
gene id AMCG00015592
gene name unc93b1
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 13442591 ~ 13453776 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015592
CCCTGTTTTCAAAAGCGGAAAGGCTTGCGAACATCTGGGTTTATCTgtctcattttaaatgtctctcGAAATCGAAAACAGGaactttctgtgtgtgtcagactcTCTCTATAGGCGCCGTCACTTCGCTGAGCCCCTGACGGCGCACCGTGTCGGCTGTATTGCGGGCTGAGCTGTCGGTCCTGCAGACACTGAAGAGCTGCAGTTTAATCCCGACCTacagTGTTGCGGTACCCGACCTGCCCACGAGATGGCAGATGCTGACAATGTGTACGCGGAGGCCGAGCCCTGTGTGGTGCCCGACCTGGGACGCAAGGACGGACCAGTGGAGTTGCAGCACCCAGAGAGAGGAGACGATGCAGTGGAGcagatgGATGAATTCCTGGGCCCCAACCAAGACTAcaatgaggaagaggaggagaggaagtaCTACAGGAGGAAGAGGCTGGGCGTGGTGAAGAATGTGGTGGCTGCCAGTGTTGGGGGAATGCTGACCTACAGCGTCTACCTGGGCCTGTTGCAGATGCAGCTGGTGCTGCACTATGACGAGACGTACCGCGAGGTGAAGTATGGCAGTCTTGGGCTGGAGGACATCGATCGAAAGATGCTCATGGGCATCAACGTCACGCCTACTGTGGCCTTCCTGTACACTCCTGTACTGATccgGTTTCTTGGGACTAAGTGGATGATGTTCCTGGCCTCAGGAATCTATGCCCTTTTCGTGTCGACCAATTACTGGGAGCGATACTATACCCTGGTCCCATCGGCTGTGGCCATTGGTGCAGCCATCGTGCCACTTTGGGCATCGCTAGGAAACTACATCACCAGGATGGCCCAGCAGTACTATGAGTTTGACAACTATAAGGAAGAGCATGTGCAGGAGCAGAAGAAGGCTCCCAAGGGGGCATGTCACCGTTACATCATCATTTTCCAATCAATCTTCTACTCTGTCTTTCATtTCCTGGCCCTGTGTGGCTCAGCCTATCGGCCCACAGAGGAGATAGACCTGCGCAGTATTGGCTGGGGGAACATCTTCCAGCTGCCATTCAAACACCTGAGAGACTATAGGCTGAGATTCCTCTGTCCTGCCTTCATATACAGTGGACTGGAGCTGCTGTTCGCCATCACTGGACTGACACtgGTCAAAGGTTATCGCTACCTGGAGGAGGAGAATTCTGATGAATCAGAGTCTGAGAAGAGCGATGCGGAGGAATTACCGGACGGGGAGGACAGGGACAATGACTCCCACACCTCCTATTCGCTGGAGGGTGAAGAGCGTGGGGGCAGGgggcggaggaggaggcgggATTACGCATATGAGCAagcaggggagggggaggagtaTGTACAGCCggaacagtgagagagagagaggagggaggtgtAGAGAACGAAGGGGAAGGGGCAGGGTGATGAAGTGGGAATATAAGGTGAGAAGGATTGTGCAAGGGACTGGGAAGAGAGAGGACGGGGGGAGGGATAGGGACAGGAGaaaag

Function

symbol description
unc93b1 Predicted to enable Toll-like receptor binding activity. Acts upstream of or within regulation of toll-like receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endosome and lysosome. Is expressed in heart; liver; muscle; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in brain disease. Orthologous to human UNC93B1 (unc-93 homolog B1, TLR signaling regulator).

NR:

description
PREDICTED: protein unc-93 homolog B1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015592 True 1497 mRNA 0.55 8 13442591 13453776

Neighbor

gene id symbol gene type direction distance location
AMCG00015595 NA coding downstream 10235 13426856 ~ 13432356 (-)
AMCG00015593 LOC108268441,LOC105020884,LOC101159514,LOC107676536,LOC107741212,LOC105028768 coding downstream 17715 13424469 ~ 13424876 (-)
AMCG00015596 NA coding downstream 32883 13369403 ~ 13409708 (-)
AMCG00015594 NA coding downstream 77614 13361424 ~ 13364977 (-)
AMCG00015589 NA coding downstream 131370 13285470 ~ 13311221 (-)
AMCG00015599 NA coding upstream 66888 13520664 ~ 13521014 (-)
AMCG00015603 NA coding upstream 152599 13606375 ~ 13624705 (-)
AMCG00015601 NA coding upstream 209881 13663657 ~ 13665777 (-)
AMCG00015605 NA coding upstream 287121 13740897 ~ 13742235 (-)
AMCG00015604 NA coding upstream 300292 13754068 ~ 13760730 (-)
G98950 NA non-coding downstream 26091 13396647 ~ 13416500 (-)
G98953 NA non-coding downstream 106662 13329892 ~ 13335929 (-)
G98844 NA non-coding downstream 180364 13261011 ~ 13262227 (-)
G98836 NA non-coding downstream 193308 13248836 ~ 13249283 (-)
G98671 NA non-coding downstream 918516 12523793 ~ 12524075 (-)
G98973 NA non-coding upstream 11082 13464858 ~ 13519520 (-)
G98993 NA non-coding upstream 84751 13538527 ~ 13540957 (-)
G98992 NA non-coding upstream 85842 13539618 ~ 13539998 (-)
G99002 NA non-coding upstream 125949 13579725 ~ 13816527 (-)
G99049 NA non-coding upstream 429347 13883123 ~ 13884670 (-)
AMCG00015557 map3k11,LOC101463885,LOC102206973,LOC102778058,LOC100707946 other downstream 1011943 12399733 ~ 12430648 (-)
G98546 NA other downstream 2025929 11414367 ~ 11416662 (-)
G98543 NA other downstream 2056392 11353783 ~ 11386199 (-)
AMCG00015540 NA other downstream 2097101 11332663 ~ 11345490 (-)
AMCG00015535 NA other downstream 2181423 11185860 ~ 11261168 (-)
AMCG00015598 timm10,LOC107746912,LOC107674252,LOC107556822 other upstream 4351 13458127 ~ 13468822 (-)
AMCG00015606 NA other upstream 217539 13671315 ~ 13845677 (-)
AMCG00015612 zdhhc5a,zdhhc5 other upstream 380741 13834517 ~ 13864738 (-)
AMCG00015628 NA other upstream 841192 14294968 ~ 14336329 (-)
G99213 NA other upstream 993935 14447711 ~ 14456695 (-)

Expression


Co-expression Network