AMCG00015593 (LOC108268441,LOC105020884,LOC101159514,LOC107676536,LOC107741212,LOC105028768)


Basic Information

Item Value
gene id AMCG00015593
gene name LOC108268441,LOC105020884,LOC101159514,LOC107676536,LOC107741212,LOC105028768
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 13424469 ~ 13424876 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015593
ATGGAGATCATGGATGATGACGTGCCCAGCCTCTTCTCCTACGGCTTCACTGACAGAGTGGGCAGCATCATGGTCAGCTGTGGGACGTGGGTTGGGTACCAGTACCCCGGTTACCGTGGCTACCAGTACCTCTTGGAGAAAGGGGACTACAGGCATTGGAATGAGTGGGGGGCACGCACCCCTCAGATCCAGTCCATGAGGCGCATTAGAGACATGCAGTGGCACCAGCACGGCTGCTACACCATGGCCagcaagtga

Function

NR:

description
PREDICTED: uncharacterized protein LOC108268441 isoform X6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015593 True 258 mRNA 0.58 2 13424469 13424876

Neighbor

gene id symbol gene type direction distance location
AMCG00015596 NA coding downstream 14761 13369403 ~ 13409708 (-)
AMCG00015594 NA coding downstream 59492 13361424 ~ 13364977 (-)
AMCG00015589 NA coding downstream 113248 13285470 ~ 13311221 (-)
AMCG00015586 NA coding downstream 230988 13181838 ~ 13193481 (-)
AMCG00015582 NA coding downstream 316015 13098638 ~ 13108454 (-)
AMCG00015595 NA coding upstream 1980 13426856 ~ 13432356 (-)
AMCG00015592 unc93b1 coding upstream 17715 13442591 ~ 13453776 (-)
AMCG00015599 NA coding upstream 95788 13520664 ~ 13521014 (-)
AMCG00015603 NA coding upstream 181499 13606375 ~ 13624705 (-)
AMCG00015601 NA coding upstream 238781 13663657 ~ 13665777 (-)
G98950 NA non-coding downstream 7969 13396647 ~ 13416500 (-)
G98953 NA non-coding downstream 88540 13329892 ~ 13335929 (-)
G98844 NA non-coding downstream 162242 13261011 ~ 13262227 (-)
G98836 NA non-coding downstream 175186 13248836 ~ 13249283 (-)
G98671 NA non-coding downstream 900394 12523793 ~ 12524075 (-)
G98973 NA non-coding upstream 39982 13464858 ~ 13519520 (-)
G98993 NA non-coding upstream 113651 13538527 ~ 13540957 (-)
G98992 NA non-coding upstream 114742 13539618 ~ 13539998 (-)
G99002 NA non-coding upstream 154849 13579725 ~ 13816527 (-)
G99049 NA non-coding upstream 458247 13883123 ~ 13884670 (-)
AMCG00015557 map3k11,LOC101463885,LOC102206973,LOC102778058,LOC100707946 other downstream 993821 12399733 ~ 12430648 (-)
G98546 NA other downstream 2007807 11414367 ~ 11416662 (-)
G98543 NA other downstream 2038270 11353783 ~ 11386199 (-)
AMCG00015540 NA other downstream 2078979 11332663 ~ 11345490 (-)
AMCG00015535 NA other downstream 2163301 11185860 ~ 11261168 (-)
AMCG00015598 timm10,LOC107746912,LOC107674252,LOC107556822 other upstream 33251 13458127 ~ 13468822 (-)
AMCG00015606 NA other upstream 246439 13671315 ~ 13845677 (-)
AMCG00015612 zdhhc5a,zdhhc5 other upstream 409641 13834517 ~ 13864738 (-)
AMCG00015628 NA other upstream 870092 14294968 ~ 14336329 (-)
G99213 NA other upstream 1022835 14447711 ~ 14456695 (-)

Expression


Co-expression Network