Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00015594 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 13361424 ~ 13364977 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00015594 | True | 216 | mRNA | 0.56 | 3 | 13361424 | 13364977 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015589 | NA | coding | downstream | 50203 | 13285470 ~ 13311221 (-) |
| AMCG00015586 | NA | coding | downstream | 167943 | 13181838 ~ 13193481 (-) |
| AMCG00015582 | NA | coding | downstream | 252970 | 13098638 ~ 13108454 (-) |
| AMCG00015579 | NA | coding | downstream | 283669 | 13072507 ~ 13077755 (-) |
| AMCG00015578 | NA | coding | downstream | 306386 | 13039548 ~ 13055038 (-) |
| AMCG00015596 | NA | coding | upstream | 4426 | 13369403 ~ 13409708 (-) |
| AMCG00015593 | LOC108268441,LOC105020884,LOC101159514,LOC107676536,LOC107741212,LOC105028768 | coding | upstream | 59492 | 13424469 ~ 13424876 (-) |
| AMCG00015595 | NA | coding | upstream | 61879 | 13426856 ~ 13432356 (-) |
| AMCG00015592 | unc93b1 | coding | upstream | 77614 | 13442591 ~ 13453776 (-) |
| AMCG00015599 | NA | coding | upstream | 155687 | 13520664 ~ 13521014 (-) |
| G98953 | NA | non-coding | downstream | 25495 | 13329892 ~ 13335929 (-) |
| G98844 | NA | non-coding | downstream | 99197 | 13261011 ~ 13262227 (-) |
| G98836 | NA | non-coding | downstream | 112141 | 13248836 ~ 13249283 (-) |
| G98671 | NA | non-coding | downstream | 837349 | 12523793 ~ 12524075 (-) |
| G98662 | NA | non-coding | downstream | 890984 | 12470098 ~ 12470440 (-) |
| G98950 | NA | non-coding | upstream | 31670 | 13396647 ~ 13416500 (-) |
| G98973 | NA | non-coding | upstream | 99881 | 13464858 ~ 13519520 (-) |
| G98993 | NA | non-coding | upstream | 173550 | 13538527 ~ 13540957 (-) |
| G98992 | NA | non-coding | upstream | 174641 | 13539618 ~ 13539998 (-) |
| G99002 | NA | non-coding | upstream | 214748 | 13579725 ~ 13816527 (-) |
| AMCG00015557 | map3k11,LOC101463885,LOC102206973,LOC102778058,LOC100707946 | other | downstream | 930776 | 12399733 ~ 12430648 (-) |
| G98546 | NA | other | downstream | 1944762 | 11414367 ~ 11416662 (-) |
| G98543 | NA | other | downstream | 1975225 | 11353783 ~ 11386199 (-) |
| AMCG00015540 | NA | other | downstream | 2015934 | 11332663 ~ 11345490 (-) |
| AMCG00015535 | NA | other | downstream | 2100256 | 11185860 ~ 11261168 (-) |
| AMCG00015598 | timm10,LOC107746912,LOC107674252,LOC107556822 | other | upstream | 93150 | 13458127 ~ 13468822 (-) |
| AMCG00015606 | NA | other | upstream | 306338 | 13671315 ~ 13845677 (-) |
| AMCG00015612 | zdhhc5a,zdhhc5 | other | upstream | 469540 | 13834517 ~ 13864738 (-) |
| AMCG00015628 | NA | other | upstream | 929991 | 14294968 ~ 14336329 (-) |
| G99213 | NA | other | upstream | 1082734 | 14447711 ~ 14456695 (-) |
