AMCG00015596


Basic Information

Item Value
gene id AMCG00015596
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 13369403 ~ 13409708 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015596
ATGGAAAATGGGAGCCTACCTAATCTGCTCGAGGACATAGATGTTGACGAGGAAATAAACCCTGCGGACATGGAGCATAGTGACGCAGACAACTCTGACAGCAGTTCTTCAGAAATGACTGTAGAATCCCATCATTCGCCTGGATCTGAGGCCAAGCAGAAAAATTACACCTTTGAGGAACATAGTAGCTCACAGAGCAAGGTATCTCCAGTACTCCCTCAAGATGGCCCAAAGAAGTCACTCAAAAGACCATGGACAAATGCAGAAGTGATGGCTGTCAATAAACACTTCAGCCGCCACATCTCCAATGGTTCCCTTGCAACCAAGCAGGAGTGTAAGGCCTGCAAAGAAGCTGAAGAGCCAGCCCTAAACTCAAGATCCATACAGAAGATCAGAGACTTTGGCGTGCACGGTGACAGGGCCGTGTGGACGCGTCCCCTGTgcggcaggcaggcaggcaggcaggcaggcaggcgctGCGCGGGTTGTCTACAGTATACGGCAGCGCACAGAAGCCCCTCTGGCCCGGAACAGCTCGGCGGAGGCAGCAGCCGCACGGCAGTTTGCGTGGCGAGCAGCGCCGTGTCCGCCCGTGTGACGCAGCCAGCGCACAGGATGCGTCCGCAGGCCGAGGCTGCAGCCCGGGGCACGATGGCGCTGTCTGTGGCCGCGTTTCAGACGCAGCTCGTCTCGGTGCTGGAGACTCTGCTCGGGGCGGCTGAGTCTGAGGTCGCGCAGCTCGCCGGGGTCCGGACAGCCCGAGTCGCCGCCGTCCTGCGGACTCTGCTCGGAGCGGCTGTGAGGGAAATTACACGGCTTTACGAGGGTGAAGCGCTGGCGAGCGGCCCGGACTCGGACTCGGACTCGGACTCGGACTCCATTGCTTTACTACAAGTACAATCCGCAGGCCGAGGCTGCAGCCCGGGCACGATGGCGCTGTCTGTGGCCGCGTTTCAGACGCAGCTCGTCTCGGTGCTGGAGACTCTGCTCGGGGCGGCTGAGTCTGAGGTCGCGCAGCTCGCCGGGGTCCGGACAGCCCGAGTCGCCGCCGTCCTGCAGACTCTGCTCGGAGCGGCTGTGAGGGAAATTACACGGCTTTACGAGAGCAGCGTGGCCGGTTTCCACACAGAAACAGCCCCGGGAAATGAAGACACGCCGCCCCTGAAGAGGACGCTGCCTCGGCCGGAGAGCGAGTGCGGAGGGCAGGCGGAGGCTGCGGGGATCAGCCGCCCGGCGGGAGTGCGGGACTGCGAGGGCAGCTCGGCGGCGGAGGAGGATGCTATTCATAATATAGGATCCCATTGCATAAACCCTGAGGTAACTGACTATGGCAAGGTCAAAGAGGAGGCCAAGCTGCAGTGTGCACCCAATGCAGAGTGCAGAGCTGAGGCAAGTCATGCCCAGCAGGATCAGCACCAAGATGAATCGGAAACAACCGAAGGACAGCAAGGATTGAAGATCGAGAAGAAACCCCCAAAGGAGCCAGTGGAGATTCTGAGCTCCTGCCTCTGCCAGTCCGCCTCCTGTCTCATGGAATTCAACTTCTATGTGGAAGCACTGAAGAGTTGGGCTGATGCACAGAACTACTGCAGACAAAACTACAAGAACATGTCCTCCGTGGAGAGTGAGGAGGAACTGCAGCAGCTTCTCCTGGCAGCCAGAGGAACCACTATGGACTCAGCATGGATCGGCCTGTACAGTGAGACACCGAACTGGCAGTGGTCCAGCGGAGAGCCAGTTGACTTCTTTAGTTGGAGACGTCGATGCTACTGTGCCATAGTCAACCAACAGGGATTCTGGGACGATAAAAACTGCTTTGAAACTCATCCTTTTATGTGTTACGATGGTAAAGAGATCTGA

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle
ko04114 Oocyte meiosis

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015596 True 1860 mRNA 0.58 8 13369403 13409708

Neighbor

gene id symbol gene type direction distance location
AMCG00015594 NA coding downstream 4426 13361424 ~ 13364977 (-)
AMCG00015589 NA coding downstream 58182 13285470 ~ 13311221 (-)
AMCG00015586 NA coding downstream 175922 13181838 ~ 13193481 (-)
AMCG00015582 NA coding downstream 260949 13098638 ~ 13108454 (-)
AMCG00015579 NA coding downstream 291648 13072507 ~ 13077755 (-)
AMCG00015593 LOC108268441,LOC105020884,LOC101159514,LOC107676536,LOC107741212,LOC105028768 coding upstream 14761 13424469 ~ 13424876 (-)
AMCG00015595 NA coding upstream 17148 13426856 ~ 13432356 (-)
AMCG00015592 unc93b1 coding upstream 32883 13442591 ~ 13453776 (-)
AMCG00015599 NA coding upstream 110956 13520664 ~ 13521014 (-)
AMCG00015603 NA coding upstream 196667 13606375 ~ 13624705 (-)
G98953 NA non-coding downstream 33474 13329892 ~ 13335929 (-)
G98844 NA non-coding downstream 107176 13261011 ~ 13262227 (-)
G98836 NA non-coding downstream 120120 13248836 ~ 13249283 (-)
G98671 NA non-coding downstream 845328 12523793 ~ 12524075 (-)
G98662 NA non-coding downstream 898963 12470098 ~ 12470440 (-)
G98973 NA non-coding upstream 55150 13464858 ~ 13519520 (-)
G98993 NA non-coding upstream 128819 13538527 ~ 13540957 (-)
G98992 NA non-coding upstream 129910 13539618 ~ 13539998 (-)
G99002 NA non-coding upstream 170017 13579725 ~ 13816527 (-)
G99049 NA non-coding upstream 473415 13883123 ~ 13884670 (-)
AMCG00015557 map3k11,LOC101463885,LOC102206973,LOC102778058,LOC100707946 other downstream 938755 12399733 ~ 12430648 (-)
G98546 NA other downstream 1952741 11414367 ~ 11416662 (-)
G98543 NA other downstream 1983204 11353783 ~ 11386199 (-)
AMCG00015540 NA other downstream 2023913 11332663 ~ 11345490 (-)
AMCG00015535 NA other downstream 2108235 11185860 ~ 11261168 (-)
AMCG00015598 timm10,LOC107746912,LOC107674252,LOC107556822 other upstream 48419 13458127 ~ 13468822 (-)
AMCG00015606 NA other upstream 261607 13671315 ~ 13845677 (-)
AMCG00015612 zdhhc5a,zdhhc5 other upstream 424809 13834517 ~ 13864738 (-)
AMCG00015628 NA other upstream 885260 14294968 ~ 14336329 (-)
G99213 NA other upstream 1038003 14447711 ~ 14456695 (-)

Expression


Co-expression Network