AMCG00015599


Basic Information

Item Value
gene id AMCG00015599
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 13520664 ~ 13521014 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015599
ATGGGCTACATGCCCACTGAGATGGAGCTGATCGAGCTCAGCCAGCAGATCTgtggagGAAGGGTGGACTTTGAAGACTTTGTGGAACTGATGGGTCCCAAGATGCTGGCAGAGACAGCAGACATGATCGGAGTGAAGGAGCTGAGAGACGCCTTCCGAGAGGTCTGCTCAGTAACTACTAATCAATAA

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015599 True 189 mRNA 0.52 2 13520664 13521014

Neighbor

gene id symbol gene type direction distance location
AMCG00015592 unc93b1 coding downstream 66888 13442591 ~ 13453776 (-)
AMCG00015595 NA coding downstream 88308 13426856 ~ 13432356 (-)
AMCG00015593 LOC108268441,LOC105020884,LOC101159514,LOC107676536,LOC107741212,LOC105028768 coding downstream 95788 13424469 ~ 13424876 (-)
AMCG00015596 NA coding downstream 110956 13369403 ~ 13409708 (-)
AMCG00015594 NA coding downstream 155687 13361424 ~ 13364977 (-)
AMCG00015603 NA coding upstream 85361 13606375 ~ 13624705 (-)
AMCG00015601 NA coding upstream 142643 13663657 ~ 13665777 (-)
AMCG00015605 NA coding upstream 219883 13740897 ~ 13742235 (-)
AMCG00015604 NA coding upstream 233054 13754068 ~ 13760730 (-)
AMCG00015613 NA coding upstream 305963 13826977 ~ 13829722 (-)
G98973 NA non-coding downstream 1144 13464858 ~ 13519520 (-)
G98950 NA non-coding downstream 104164 13396647 ~ 13416500 (-)
G98953 NA non-coding downstream 184735 13329892 ~ 13335929 (-)
G98844 NA non-coding downstream 258437 13261011 ~ 13262227 (-)
G98836 NA non-coding downstream 271381 13248836 ~ 13249283 (-)
G98993 NA non-coding upstream 17513 13538527 ~ 13540957 (-)
G98992 NA non-coding upstream 18604 13539618 ~ 13539998 (-)
G99002 NA non-coding upstream 58711 13579725 ~ 13816527 (-)
G99049 NA non-coding upstream 362109 13883123 ~ 13884670 (-)
G99051 NA non-coding upstream 380342 13901356 ~ 13902314 (-)
AMCG00015598 timm10,LOC107746912,LOC107674252,LOC107556822 other downstream 51842 13458127 ~ 13468822 (-)
AMCG00015557 map3k11,LOC101463885,LOC102206973,LOC102778058,LOC100707946 other downstream 1090016 12399733 ~ 12430648 (-)
G98546 NA other downstream 2104002 11414367 ~ 11416662 (-)
G98543 NA other downstream 2134465 11353783 ~ 11386199 (-)
AMCG00015540 NA other downstream 2175174 11332663 ~ 11345490 (-)
AMCG00015606 NA other upstream 150301 13671315 ~ 13845677 (-)
AMCG00015612 zdhhc5a,zdhhc5 other upstream 313503 13834517 ~ 13864738 (-)
AMCG00015628 NA other upstream 773954 14294968 ~ 14336329 (-)
G99213 NA other upstream 926697 14447711 ~ 14456695 (-)
G99286 NA other upstream 960180 14481194 ~ 14482908 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000000_05431517_05435978 CABP2B, CABP2 coding CI01000000 null 5431517 ~ 5435978 (-)