AMCG00015603


Basic Information

Item Value
gene id AMCG00015603
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 13606375 ~ 13624705 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015603
ATGATGACAGCCGGCCAATTGAAGAATCCGGCTGTGATGCAATCTCAAGCTGTAATTGAAGATTATGAGAACTCAGGTTTCGACAAAGGCCACCTGGTCCCCGTCTGTCACCGGAGCAGCAAGGACAGCAAAATCAGCACCTTCACTCTGACCAACGCCGTTCCACAGAACCCCAGCTTTAACAGAGGGAAGTGGAGAGTGCAGGAGACAGAGCTGAAAGCTTACATTATGAAAAACTGTCAGAAGGATCAGAATAATAAGCCTCTGGCCAAACTCATTACAGGTTATCACTACCAATTATGCAGGCGGCCCTGTGGAAATAAACTCTTCATGTATCTGAAGAAGTTGCTGATCGTCTCCTACTATGGTGATATTGACAACGACCCTTGCCTGTCTCCAAATGCTCTCGAGGAACGCATGGCGAAAATATCGGCTGGGGATCTGGGCACTGGAGGGAATCCACACTCGTGCGAAAGAGGAGCATTGGGAGAGTCACATGACAGAGCAGCCCCACCCGTCCTTGCGAGAGATGGTGGTGGCCCAACGCAGCCAGCTCAGCCGCGGGGGGGTGTAGGGGGGGTAGCGCAGCACATTGACCCGCTCCAGGCCCCACCCCCGCAGCATCACCGCCCGGCTGTGCGAGAATGTGTCGAAGCCCCAGCGCCCATGGTACCGGCCCATCCCACTagcacctga

Function

GO:

id name namespace
GO:0006081 cellular aldehyde metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0004030 aldehyde dehydrogenase [NAD(P)+] activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015603 True 696 mRNA 0.54 3 13606375 13624705

Neighbor

gene id symbol gene type direction distance location
AMCG00015599 NA coding downstream 85361 13520664 ~ 13521014 (-)
AMCG00015592 unc93b1 coding downstream 152599 13442591 ~ 13453776 (-)
AMCG00015595 NA coding downstream 174019 13426856 ~ 13432356 (-)
AMCG00015593 LOC108268441,LOC105020884,LOC101159514,LOC107676536,LOC107741212,LOC105028768 coding downstream 181499 13424469 ~ 13424876 (-)
AMCG00015596 NA coding downstream 196667 13369403 ~ 13409708 (-)
AMCG00015601 NA coding upstream 38952 13663657 ~ 13665777 (-)
AMCG00015605 NA coding upstream 116192 13740897 ~ 13742235 (-)
AMCG00015604 NA coding upstream 129363 13754068 ~ 13760730 (-)
AMCG00015613 NA coding upstream 202272 13826977 ~ 13829722 (-)
AMCG00015611 clp1,LOC107750374,LOC107680590,LOC107594950 coding upstream 241146 13865851 ~ 13869990 (-)
G98993 NA non-coding downstream 65418 13538527 ~ 13540957 (-)
G98992 NA non-coding downstream 66377 13539618 ~ 13539998 (-)
G98973 NA non-coding downstream 86855 13464858 ~ 13519520 (-)
G98950 NA non-coding downstream 189875 13396647 ~ 13416500 (-)
G98953 NA non-coding downstream 270446 13329892 ~ 13335929 (-)
G99049 NA non-coding upstream 258418 13883123 ~ 13884670 (-)
G99051 NA non-coding upstream 276651 13901356 ~ 13902314 (-)
G99055 NA non-coding upstream 293370 13918075 ~ 13918324 (-)
G99058 NA non-coding upstream 300543 13925248 ~ 13931122 (-)
G99063 NA non-coding upstream 409553 14034258 ~ 14038303 (-)
AMCG00015598 timm10,LOC107746912,LOC107674252,LOC107556822 other downstream 137553 13458127 ~ 13468822 (-)
AMCG00015557 map3k11,LOC101463885,LOC102206973,LOC102778058,LOC100707946 other downstream 1175727 12399733 ~ 12430648 (-)
G98546 NA other downstream 2189713 11414367 ~ 11416662 (-)
G98543 NA other downstream 2220176 11353783 ~ 11386199 (-)
AMCG00015540 NA other downstream 2260885 11332663 ~ 11345490 (-)
AMCG00015606 NA other upstream 46610 13671315 ~ 13845677 (-)
AMCG00015612 zdhhc5a,zdhhc5 other upstream 209812 13834517 ~ 13864738 (-)
AMCG00015628 NA other upstream 670263 14294968 ~ 14336329 (-)
G99213 NA other upstream 823006 14447711 ~ 14456695 (-)
G99286 NA other upstream 856489 14481194 ~ 14482908 (-)

Expression


Co-expression Network