AMCG00015614


Basic Information

Item Value
gene id AMCG00015614
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 14057339 ~ 14076142 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015614
CCGGGGGCGGGTCTGCGCAGGCGCAGCTGACCCGGGGCGCTGCAGTGAAGCAGGAAGTGAGAGGGTCGAGCTGCCTGCGCTGCTCAGCATTACAATTAACCACCTCGGAGTGAGCGCAGCTGCTTCAGAGCCGGAAAAACCTGCGTgtcagagagaggaagagaaaaacagaaagaaataaaaagaaagtctAATCTTGTACTCAGGTGCGATGGGCGCTCTCTTCCGCAGCGAGGAGGTGTGCCTTGTTCAGCTCTTCCTCCAAGCAGGATCAGCCTACGACTGTGTCAGTGAGCTGGGAGAGCTGGGACTGGTGGAGTTTCGAGATTTGAACCCTGGAGTCAATTCGTTCCAGAGGAAGTTTGTGGGGGAAGTGAGGCGCTGTGAGGAGATGGAGAAGACCTTGTCCTTCCTGGAGCAGGAGATCCAGCGCTCCATGTCTCCCCCTGTGTCTGGCCCACTGACCCCCCCCTCCCCGGCCCCACCTGCGCCCACCCCCCGTGAGGCCCTGCAGATCCAGGAGGAGAGTGAGAGTCTGGCCCAGGAGCTGCGCCAAGTCTCCCAGAACAGGGCCTCCCTCCGAGCCCAACTGGTCCAGCTCACCCAGTACCGCCGGGTCCTGCTGCAGACACACAACCTGACTGGCACTCTGAGCCAGacccctctgtctcctccagACGCTGGACTGGACCGCAGACAGGATGTCCGACTGAGtttcATTGCAGGGGTGGTGCACCCCTTGAAGGCGGCAGCATTTGAGCGGTTGCTATGGCGAGCGTGTCGTGGTTATATCATCGTCAATTTCCAGGAGATGGAGGAGCCCATGGAGGTGCCTGAGACGGGGGAGATGGTGCAGTGGAAGGTGTTCCTCATCTCCTATTGGGGGGACCAGATCGGCCAGAAGGTGAAGAAGATCTGTGATTGttatCACACTCCCACATTCTCATATCCAGAGACTCCAGAGGAGCGACAGGATGTCCTGCAGGGGTTGGAGAGACGTATAGAGGAGATGAGTGCGgtgctgGAGCAGACGCAGCAGTTCCTGCATCAGGTGCTGAGCCGTGCGGTGGCCAAGGGGGTGGGCTGGGCAGTGCAGGTGCGCAAGATGAAGGCCGTGTACCTGACCCTCAACCTCTGCAGCCCCTCCCTGACGGACAAGTGCCTGATTGCCGAGGCCTGGTGCCCCGTGGCTGAGCTGCCCAAACTGAACACTGCGCTTAAAGAGGGATCGagcaaGAGTGGCTCGGGGGTGCAGTCGTTCTATAACCGCATTCCAGCACCCTGCACCCCCCCCACGCTGTTCCGCACCAATGCCTTCACCGTGGGCTTCCAGAACATCGTCGACGCCTATGGGGTCGCCACCTACAGAGAGGTCAACCCAGcggtGTTCACCATCGTGACATTCCCCTTCCTCTTCGCTGTGATGTTTGGTGATGTGGGCCACGGCCTCCTGATGGTGCTGTTTGGCATCTGGCTCATCCTGCAGGAGAAGGACCCCATTATCCGCGACAACCCCAACGAGgtTTGGCGCATGATATTTGGGGGGCGGTACCTGGTGCTGTTGATGGGGCTTTTCTCTGTGTACACTGGCGCCATCTACAACGAGTGCTTCAGCCGCGCCATGTCGCCCTTCCCCTCCGCCTGGCACGTCTCGCCCATGTTCACCAATGGCAACTGGAGTACACAGACTCTCAGAGGGAATCCGTTCCTCAGTCTGGACCCCTGTGTCTCGGGAGTGTACCAAGGCCCGTATCCATTCGGCATCGACCCGaTCTGGAGTTTGTCCAATAATCACCTGAACTTTCTGAACTCCTACAAGATGAAGATGTCGGTGATCATCGGGGTCATTCACATGACCTTCggggtctgtctgtctgtctgcaactACAGgcactTTCGTGAGGTGTCCAGTATTGTGCTGGTGTTTATCCCTGAGGTGCTCTTCCTGCTCTGTCTGTTCGGCTTCCTGGTCTTCCTAATTGTGTTCAAGTGGGTCTCCCTGGGCTCGGACCAGTCCCGCTACGCCCCCAGCATCCTTATCCACTTCATCGACATGTTCCTGTTCACTGACAACAAGGACAACCCTGTGCTCTTCACTGGACAGctgaTTGTGCAGAAGGTGTTAGtggtgtgtgctctgtgctccgtgcctgtgctgctgctggggaaACCTCTGCACCTGTGGATCAATCACTGGAAGAAAACCCAGCGCAGGgtaggggattcCTCCCAACCTGATAGGCGCCCCCTGCTGGCCTCAGAGGACCCCAGCTCCATCAATACCAATGAATGTGATCTGGAACACGGAGAGgcggaggaagaggagTTCCACATGTCAGAGGTGTTTATGCACCAGGCCATCCACACCATAGAGTACTGCCTGGGCTGCATCTCCAACACGGCCTCCTACCTACGACTGTGGGCCCTCAGCCTCGCACACGCCCAGCTGTCGGAGGTGCTGTGGTCAATGGTGATGTCCAAAGGCCTGTCGTGGCGGGGGGCACTGGGCGTGGGGGCTGGGGTGCTGGTGCCTGCTTTTGCTGTGTTCGGCGTCCTCACCGTCTCCATCTTGCTGGTCATGGAGGGGCTGTCTGCCTTCCTGCACGCTCTGAGATTGCACTgggtggaGTTCCAGAACAAGTTCTATGCCGGTGGGGGCTACAAACTCAGCCCCTTCTCCTTCGCCACCATTCTCAACCCCATCGTTAACTGATTATCAGCCAATTAGCCAGTTAAGCCTTGTTAGGGTCCATTGACTTGAATGCTCACCACCCCCAGAGAATAAACACTGTGGTGTGGAGTGAGGACTCCTgatcccccccctcccacccacTCACAAGCTctgcaattaataataatgcttaaCGAGGAGAGAGAATTTCCATAGCTGCCTTAAACACCTTCCTTtctcttgtctgtctgtctgtctttgtctcttTTGCCCTGTCAATGTAATCcagagcaacaacaaaaacaaattaaagtttgatttttgcttttttaa

Function

GO:

id name namespace
GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain cellular_component
GO:0015078 proton transmembrane transporter activity molecular_function

KEGG:

id description
K02154 ATPeV0A, ATP6N; V-type H+-transporting ATPase subunit a

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015614 True 3004 mRNA 0.57 20 14057339 14076142

Neighbor

gene id symbol gene type direction distance location
AMCG00015611 clp1,LOC107750374,LOC107680590,LOC107594950 coding downstream 187349 13865851 ~ 13869990 (-)
AMCG00015613 NA coding downstream 227617 13826977 ~ 13829722 (-)
AMCG00015604 NA coding downstream 296609 13754068 ~ 13760730 (-)
AMCG00015605 NA coding downstream 315104 13740897 ~ 13742235 (-)
AMCG00015601 NA coding downstream 391562 13663657 ~ 13665777 (-)
AMCG00015615 NA coding upstream 3352 14079494 ~ 14084022 (-)
AMCG00015623 NA coding upstream 21283 14097425 ~ 14101752 (-)
AMCG00015620 NA coding upstream 37852 14113994 ~ 14118650 (-)
AMCG00015621 NA coding upstream 46324 14122466 ~ 14128364 (-)
AMCG00015624 NA coding upstream 71380 14147522 ~ 14154144 (-)
G99063 NA non-coding downstream 19036 14034258 ~ 14038303 (-)
G99058 NA non-coding downstream 126217 13925248 ~ 13931122 (-)
G99055 NA non-coding downstream 139015 13918075 ~ 13918324 (-)
G99051 NA non-coding downstream 155025 13901356 ~ 13902314 (-)
G99049 NA non-coding downstream 172669 13883123 ~ 13884670 (-)
G99165 NA non-coding upstream 13895 14090037 ~ 14091815 (-)
G99167 NA non-coding upstream 29312 14105454 ~ 14106445 (-)
G99217 NA non-coding upstream 382323 14458465 ~ 14464160 (-)
G99296 NA non-coding upstream 462529 14538671 ~ 14603977 (-)
G99289 NA non-coding upstream 466819 14542961 ~ 14624486 (-)
AMCG00015612 zdhhc5a,zdhhc5 other downstream 192601 13834517 ~ 13864738 (-)
AMCG00015606 NA other downstream 211662 13671315 ~ 13845677 (-)
AMCG00015598 timm10,LOC107746912,LOC107674252,LOC107556822 other downstream 588517 13458127 ~ 13468822 (-)
AMCG00015557 map3k11,LOC101463885,LOC102206973,LOC102778058,LOC100707946 other downstream 1626691 12399733 ~ 12430648 (-)
G98546 NA other downstream 2640677 11414367 ~ 11416662 (-)
AMCG00015628 NA other upstream 218826 14294968 ~ 14336329 (-)
G99213 NA other upstream 371569 14447711 ~ 14456695 (-)
G99286 NA other upstream 405052 14481194 ~ 14482908 (-)
AMCG00015640 LOC103356187,LOC107382365,LOC107664566,LOC107551445,LOC107556825,LOC101483122,LOC102289392 other upstream 426622 14502764 ~ 14515279 (-)
AMCG00015642 LOC102792555 other upstream 494509 14570651 ~ 14577633 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location