AMCG00015615


Basic Information

Item Value
gene id AMCG00015615
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 14079494 ~ 14084022 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015615
gatgcGGTGATGCTGCACAGCTTCACTCTGCGGCAGCAGTTGCAGACGACGCGACAGGAGCTCTCCCACGCGCTGTACCAGCATGACGCCGCCTGCCGTGTCATCGCCCGTCTCACCAAGGAGGTCACAGCCGCTCGAGAGGCTCTGGCCACTCTGAAGCCTCAAGCCGGATTGATTGTGCCTCAGGCTGTGCCCTCCTCTCAGCCCACCGCTGCGCTGCAAGACAAGGCTACTGTGCTGACCACCGAGAGAAAGAAGaGAGGGAAGACTGTTCCCGAAGAGTTGGTCAGAGCTGAGGATCTTGGCAAGTACAGACAAGTGGCTTCTCACGCTggTCTGCACAGTGCCAGTATCCCAGGAATCCTTGCTCTTGATCTTTGCCCCACAGACACCAACAAAGTGCTCACAGGTGAAAAACAACTCTcctttctgtatgtgtgtgtttgcgtgcgCATGAGAGAGGTTATCCGTGCTCACGAAGGGGGGGTGACTGGTCTGTCCCTCCACGCCACTGGAGACTACCTGCTAAGCTCCTCTGAGGACCAGtACTGGGCATTCTCTGATATCCAGACTGGACGAGTGCTCACCAAGGTTACTGACGAGACGGCTAGCTGTGCCCTGACCTGCGCCCAGTTCCACCCTGATGGCCTGATCTTTGGCACGGGCACGGCCGACTCTCAGATCAAGATCTGGGACCTGAAGGAGAGGACCAATGTGGCCAACTTCCCCGGCCACAGCGGCCCAGTCACTGCCATCGCCTTCTCTGAGAACGGCTACTACCTGGCCACGGGCGCACAGGACTGCTCTGTCCGGCTGTGGGATCTGCGCAAGCTCAAGAACTTTAAGACCATCACCCTGGACCACGCCTATGagGTTATAATGCTCTACCAGAGTGCAACTAAGAagcACACTGGGCTGGTGACTGGTGTGGCGTTTGGCCAGCACTCCCAGTTCCTCACCTCCTCCGGGATGGATCGCAGCCTCAAGTTCTACAGCCTGTGA

Function

GO:

id name namespace
GO:0009987 cellular process biological_process

KEGG:

id description
K10599 PRPF19, PRP19; pre-mRNA-processing factor 19

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015615 True 1002 mRNA 0.58 10 14079494 14084022

Neighbor

gene id symbol gene type direction distance location
AMCG00015614 NA coding downstream 3352 14057339 ~ 14076142 (-)
AMCG00015611 clp1,LOC107750374,LOC107680590,LOC107594950 coding downstream 209504 13865851 ~ 13869990 (-)
AMCG00015613 NA coding downstream 249772 13826977 ~ 13829722 (-)
AMCG00015604 NA coding downstream 318764 13754068 ~ 13760730 (-)
AMCG00015605 NA coding downstream 337259 13740897 ~ 13742235 (-)
AMCG00015623 NA coding upstream 13403 14097425 ~ 14101752 (-)
AMCG00015620 NA coding upstream 29972 14113994 ~ 14118650 (-)
AMCG00015621 NA coding upstream 38444 14122466 ~ 14128364 (-)
AMCG00015624 NA coding upstream 63500 14147522 ~ 14154144 (-)
AMCG00015622 NA coding upstream 81676 14165698 ~ 14172599 (-)
G99063 NA non-coding downstream 41191 14034258 ~ 14038303 (-)
G99058 NA non-coding downstream 148372 13925248 ~ 13931122 (-)
G99055 NA non-coding downstream 161170 13918075 ~ 13918324 (-)
G99051 NA non-coding downstream 177180 13901356 ~ 13902314 (-)
G99049 NA non-coding downstream 194824 13883123 ~ 13884670 (-)
G99165 NA non-coding upstream 6015 14090037 ~ 14091815 (-)
G99167 NA non-coding upstream 21432 14105454 ~ 14106445 (-)
G99217 NA non-coding upstream 374443 14458465 ~ 14464160 (-)
G99296 NA non-coding upstream 454649 14538671 ~ 14603977 (-)
G99289 NA non-coding upstream 458939 14542961 ~ 14624486 (-)
AMCG00015612 zdhhc5a,zdhhc5 other downstream 214756 13834517 ~ 13864738 (-)
AMCG00015606 NA other downstream 233817 13671315 ~ 13845677 (-)
AMCG00015598 timm10,LOC107746912,LOC107674252,LOC107556822 other downstream 610672 13458127 ~ 13468822 (-)
AMCG00015557 map3k11,LOC101463885,LOC102206973,LOC102778058,LOC100707946 other downstream 1648846 12399733 ~ 12430648 (-)
G98546 NA other downstream 2662832 11414367 ~ 11416662 (-)
AMCG00015628 NA other upstream 210946 14294968 ~ 14336329 (-)
G99213 NA other upstream 363689 14447711 ~ 14456695 (-)
G99286 NA other upstream 397172 14481194 ~ 14482908 (-)
AMCG00015640 LOC103356187,LOC107382365,LOC107664566,LOC107551445,LOC107556825,LOC101483122,LOC102289392 other upstream 418742 14502764 ~ 14515279 (-)
AMCG00015642 LOC102792555 other upstream 486629 14570651 ~ 14577633 (-)

Expression


Co-expression Network