AMCG00015623


Basic Information

Item Value
gene id AMCG00015623
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 14097425 ~ 14101752 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015623
ATGCATACACTGGGACAGGCAGggacgATGGGGAAGAGGCTGCAGAAGATCAACGTTGAAAACACAGAGGAGCATCGGCGGCAGTTCCGCCAGCTGctgctgacctctgaccctgcGCTGTCCAACTCCATCGGTGGGGTCATCCTATTCCACGAGACGCTGTACCAGAAGAGCGACACGGGGGTGCTGTTCCCAAAAATCATCAAGGACGCTGGCATCGTAGTGGGCATCAAGGTGGACAAAGGGACAGCAGCTCTGGCTGGAACAGATGGGGAGACGACGACACAGGAGAATGCCAATGTGCTGGCAAGATACGCCAGCATCTGTCAGCAGCCCAACATGGTGACAGCCGGCCAAGCCTGCTCCCAGAAGTACACCCCCCAGGAGGTCGCCATGGCAACAGTCACTGCCCTGCGCCGTACTGTGCCAGCTGCTGTGCCCGGTATCTGTTTCCTGTCGGGGGGGCAGAGTGAGGAGGAGGCGTCGCTGAACCTGAACGCCATCAACCAGTGCCCCCTACCTCGGCCTTGGAAGCTCACCTTCTCCTATGGCCGCGCCCTGCAGGCCTCCACCCTTGCCACCTGGCAGGGCAAGCCAGGAAACACCAAGGCTGCTCAGACCACCTTCTCCACCCGGGCCAAGATCAACGGCCTGGCGTCCAAGGGGGAGTACAAGCCCAGTGGCCAGACGGACCAGTCCGCCACCCAGTCTCTCTTCAGCGCCAGCTACGTCTACTAG

Function

GO:

id name namespace
GO:0030145 manganese ion binding molecular_function

KEGG:

id description
ko04950 Maturity onset diabetes of the young

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015623 True 738 mRNA 0.61 7 14097425 14101752

Neighbor

gene id symbol gene type direction distance location
AMCG00015615 NA coding downstream 13403 14079494 ~ 14084022 (-)
AMCG00015614 NA coding downstream 21283 14057339 ~ 14076142 (-)
AMCG00015611 clp1,LOC107750374,LOC107680590,LOC107594950 coding downstream 227435 13865851 ~ 13869990 (-)
AMCG00015613 NA coding downstream 267703 13826977 ~ 13829722 (-)
AMCG00015604 NA coding downstream 336695 13754068 ~ 13760730 (-)
AMCG00015620 NA coding upstream 12242 14113994 ~ 14118650 (-)
AMCG00015621 NA coding upstream 20714 14122466 ~ 14128364 (-)
AMCG00015624 NA coding upstream 45770 14147522 ~ 14154144 (-)
AMCG00015622 NA coding upstream 63946 14165698 ~ 14172599 (-)
AMCG00015627 NA coding upstream 155073 14256825 ~ 14273368 (-)
G99165 NA non-coding downstream 5610 14090037 ~ 14091815 (-)
G99063 NA non-coding downstream 59122 14034258 ~ 14038303 (-)
G99058 NA non-coding downstream 166303 13925248 ~ 13931122 (-)
G99055 NA non-coding downstream 179101 13918075 ~ 13918324 (-)
G99051 NA non-coding downstream 195111 13901356 ~ 13902314 (-)
G99167 NA non-coding upstream 3702 14105454 ~ 14106445 (-)
G99217 NA non-coding upstream 356713 14458465 ~ 14464160 (-)
G99296 NA non-coding upstream 436919 14538671 ~ 14603977 (-)
G99289 NA non-coding upstream 441209 14542961 ~ 14624486 (-)
G99302 NA non-coding upstream 460426 14562178 ~ 14563226 (-)
AMCG00015612 zdhhc5a,zdhhc5 other downstream 232687 13834517 ~ 13864738 (-)
AMCG00015606 NA other downstream 251748 13671315 ~ 13845677 (-)
AMCG00015598 timm10,LOC107746912,LOC107674252,LOC107556822 other downstream 628603 13458127 ~ 13468822 (-)
AMCG00015557 map3k11,LOC101463885,LOC102206973,LOC102778058,LOC100707946 other downstream 1666777 12399733 ~ 12430648 (-)
G98546 NA other downstream 2680763 11414367 ~ 11416662 (-)
AMCG00015628 NA other upstream 193216 14294968 ~ 14336329 (-)
G99213 NA other upstream 345959 14447711 ~ 14456695 (-)
G99286 NA other upstream 379442 14481194 ~ 14482908 (-)
AMCG00015640 LOC103356187,LOC107382365,LOC107664566,LOC107551445,LOC107556825,LOC101483122,LOC102289392 other upstream 401012 14502764 ~ 14515279 (-)
AMCG00015642 LOC102792555 other upstream 468899 14570651 ~ 14577633 (-)

Expression


Co-expression Network