AMCG00015644


Basic Information

Item Value
gene id AMCG00015644
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 14672211 ~ 14675992 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015644
ATGGCAAGATTAGATTTCATTTCTCTGCTGGCCGCCTCCCCAGGAGCCCAAATGGCGTCCGGTCGCGCCGTCCCGCCTGTCGTGTTGTCATTGGCCGGCTGTGGGAACAGCAGCagacagagggggagggagagccGTGTTGTTACGGGTGCACGGCGGGGTGCTGTGGCGACCATGAAAACCAGGAGGAGCGGGATGGCAAGCAGGGCTGAGCCGCCAGCTGCGCCAGTGGAAACCGCACAGAAACACGTGGGAACAGGGACAACCTCCGCAAAGCTGCCCAGAGCAGTGCAAACCAGGACCAGATCAGCAGCCGCAACTGCTGCGGAAACTGCAGGACAGCCACCGGAAAGCAGggccactcctcctcctcctgctgctgctgctgctgctgctgctgctgctgtggagaCCAGCACCAGAGCCCCACATGCTGCTGTGGAGACAACTGAGACAGAACCCAGCAAGATTGCCCAGGAGACCACCAACAGTGAAGCATCCTCTGCTGCCATGGAGACTGCCCAGAGCGGAGCATCGCCTGTTGCTTTGGAATCCACGAGCGCTACAGCATTGCAAACATCCAAAGGGCAACACAACACTACAACACTAACACTGATCCCAGCCCCTGTCCCCATTCTCCCACCGCTCCCTCCACGCTCCTCTCCCCCTGGGCCTTCCCACCCTCCCTTTCCCAGCGGCCGGCCCTGGGAGAGCTGGGAGGTGCGTGCTCTGCTCGGCCTGTGGGGGGCGCCGGAGATGCAGGAGAGGCTGCGCACGTCCCTCAGGAATCACGGCATCTACAAGTCCATTTCAGAGGGGCTAGTGGCCAAGGGGGTGTGGCGCAGTGCGGAGCAGTGCAGGGACAAGGCCAAGAAACTGAAAGACCGGTATCGCAAACACAGGGCTGctctggagaaaacaaaagaaaaggggaaGAAAAGGTTCAAGTTTTTTCGTTCTCTGGAAGCCATTCTGGGTGGTGGAGAGATGGAGAgtagaagaggaggagaggagagagagagggagatggaccAGTCTGACTCATCCGACACTGGAGAGCTGGAGcgagagatggaaagagaggTGCAGGAGGAGGAATTGGAGGACATGGCTCCTCTATCTAAGCGGCAGAGAAGGGGGTGCAGGGGCAAGCGTGGGGGAAGGAGGAGAGGGTGCCACGACAGCGCAGACTATGGAGGAGACGAGGAAGAGGGAGGGCATGAAGGGGTGCTGATGCGTTTCCTGCGGGAGAGTGACGCCCACTTCCTGCAGCTCCAGTCAGACTTCCTGTccatggagagagaggagagggaagcgGACCGGCGGGCATGGGAGGAGGGACAGAGTGGGGTCAGCCACGCTTTGCTTCAGCTCACACAGGCCTTCACACGCCaagcacatgcacatgcacacacgcatgGAGAAGAAGAGCGAGGGGGACACATACGtgaagagggagaggcagagatatGGAGAGGGGGACAGGTAGAGGGACTGAGGCAGGAAGAGGGAGGGggacagacagatggagaggGACACATGAATGCAGACCAAGAGGGAGGTGGACTAAGATGGACAGCAGGGGAGGGAGGCAACACGGGAGATGGCGAGGGACAGATAGAGGGATGCAGCTATACACTGGGTGTATCCAGAGAGACACAATCcctacacaacaacacacagtcTGTGCACAAAGAGACgcaaacagcaacacaaagcCAAGCAAGGAGAGAACACAAGGAGACACAGACACCACTGCACAGCCACACTTGGAATGATCACTCTTACACATAAGACACTGTGTCACTACACATCTCTCACAGGATGCAGAAACTGAACCTCACAGGAAGTACAGTACTGACAGACATCACAGAGAGAGTGACTAGATATAGTAAAACCTAACACAGAGAAAGCGGGAGGGGGAGATGGACTGCAATATGTCTTGGAAATACAcctaacagagagagagagagagagatgagataCTGAAAAAGGCACACctaacacacagagagacagaaagggacCCAAAAATCACCATAAGCCTTTGAATGTTTGTGTCTATTTACTTACCTCATATTGTGGTATTTTAACAGACTTTATTAAACCCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015644 True 2113 mRNA 0.56 4 14672211 14675992

Neighbor

gene id symbol gene type direction distance location
AMCG00015641 LOC107382365,LOC104937879,LOC102289392 coding downstream 151925 14517458 ~ 14520286 (-)
AMCG00015635 NA coding downstream 198109 14468361 ~ 14474102 (-)
AMCG00015632 NA coding downstream 226193 14445353 ~ 14446018 (-)
AMCG00015634 ran1,ran,LOC107588340 coding downstream 228053 14436478 ~ 14444158 (-)
AMCG00015631 stx3,stx2,LOC103390944 coding downstream 238504 14420754 ~ 14433707 (-)
AMCG00015649 NA coding upstream 245320 14921312 ~ 14928105 (-)
AMCG00015651 NA coding upstream 264054 14940046 ~ 14943540 (-)
AMCG00015652 NA coding upstream 273251 14949243 ~ 14955830 (-)
AMCG00015655 NA coding upstream 418128 15094120 ~ 15108025 (-)
AMCG00015658 NA coding upstream 560142 15236134 ~ 15244894 (-)
G99289 NA non-coding downstream 47725 14542961 ~ 14624486 (-)
G99296 NA non-coding downstream 68234 14538671 ~ 14603977 (-)
G99302 NA non-coding downstream 108985 14562178 ~ 14563226 (-)
G99217 NA non-coding downstream 208051 14458465 ~ 14464160 (-)
G99162 NA non-coding downstream 453427 14062419 ~ 14218784 (-)
G99332 NA non-coding upstream 112927 14788919 ~ 14789198 (-)
G99341 NA non-coding upstream 164644 14840636 ~ 14840842 (-)
G99343 NA non-coding upstream 203768 14879760 ~ 14880075 (-)
G99390 NA non-coding upstream 204662 14880654 ~ 14881619 (-)
G99395 NA non-coding upstream 226709 14902701 ~ 14902927 (-)
AMCG00015642 LOC102792555 other downstream 94578 14570651 ~ 14577633 (-)
AMCG00015640 LOC103356187,LOC107382365,LOC107664566,LOC107551445,LOC107556825,LOC101483122,LOC102289392 other downstream 156932 14502764 ~ 14515279 (-)
G99286 NA other downstream 189303 14481194 ~ 14482908 (-)
G99213 NA other downstream 215516 14447711 ~ 14456695 (-)
AMCG00015628 NA other downstream 335882 14294968 ~ 14336329 (-)
AMCG00015645 dtx4,dtx1,LOC108426833,LOC105020655,LOC106577571,LOC106608654,LOC107683563 other upstream 4802 14680794 ~ 14738274 (-)
AMCG00015647 NA other upstream 102438 14778430 ~ 14795425 (-)
G99426 NA other upstream 426625 15102617 ~ 15189394 (-)
AMCG00015659 NA other upstream 494623 15170615 ~ 15200791 (-)
AMCG00015660 NA other upstream 573909 15249901 ~ 15252721 (-)

Expression


Co-expression Network