AMCG00015647


Basic Information

Item Value
gene id AMCG00015647
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 14778430 ~ 14795425 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015647
CACTACCTGAGCAGGGCTGCAGACCTCACTGCTGTTGCCTCTCTCTCTACAGACCACGTGTCCAAACCTCAGGTGTCCAATAAGACCCAGGTGAGTGCTGGGAGCTGCCCTCTCCTGTGCTCTGTGGCCAATGGGAGAGAGGTGACCCTGTCCTGgtacagagagggggaggagaagcCCCTGAACCACAGCAGCTCCCCTGATCTCAACACCAACCTGACTCTCCCTCTGGAGACAGAAGGACTCTCTCACTCCTACAGCTGTGTGGCCACCAACCCCGTCAGCACTGAGAGAGTCACAGTCAACCCTGGAGACCACTGCCTGGACCACGTGTCCAAACCTCAGGTGTCCAATAAGACCCAGGTCAGTGCTGGGAGCTGCCCTTTCCTGTGCTCTGTGTCCAATGGGAGAGAGGTGACGCTGTCCTGgtacagagagggggaggagaagcCCCTGAACCTCAGCAGCTCCCCTGATCTCAACACCAACCTGACTCTCCCTCTGGAGACAGAAGGACTCTCTCACTCCTACAGCTGTGTGGCCACCAACCACGTCAGCACTGAGAGAGTAACAGTCAACCCTAGAAAGCACTGCTTGGatCATGTGTCCAAACCTCAGGTGTCCAGTGAGACCCAGGTCAGTGTGAACTGTACCCTGCTGTGCTCTGTGGCCAATGGGAGAGAGGTGACCCTGTCCTGgtacagagagggggaggagaagcCCCTGAATCATACCAGTTCCCCTGATCTCAACACCCCCCTGACTCTCCCTCTGGAGACAGAAGGACTCTCTCACTCCTACAGCTaCCCCCCTCAGGAGATCACATACACCACAGTGACTGCCAAGCCCTACCAGACACAGAGAGCAGCTGGCAGCAAGAAACAGGGCTCTTCACAGGGGAATGAGTCTGACCATGGAAATACTGCTGCCTCAGGTGATGACATTGTGTATGCCTCCATTAGCCGAGGCCGCCCCCACAGACAGTCTGGCAGGTCTGCTCGCAACAAGAACATGGAAAATGACGAGTATTGCATCTACGCCGTTGTGCAGACGTAG
>TU124033
CTGTGAGGTTAAATTTGCTTCATGCTCTTAATCTATACCGCTTTCATACATCTTCCTCCCGAAAAACCTCTAAAGGGttttgcctgtctttaaatACCTGCGGTCTGCATGTTTGATGAAGTAGGTCTGTACAGAGTTCCTACAGTCGGATCAAGCTCTGATCCTGCTCAAAAGCAGGATCATTTTTGATTCCGCATCTGAGCGCAGATTGAACCCTGATCCGTGTAGTACAacaaggagagagacagaaacagaggaGCAGAAATTGAGTGACCCCCACCTccttgtgctgtgtgtctgtgtttaagaCCCCCCTCAGGAGATCACATACACCACAGTGACTGCCAAGCCCTACCAGACACAGAGAGCAGCTGGCAGCAAGAAACAGGGCTCTTCACAGGGGAATGAGTCTGACCATGGAAATACTGCTGCCTCAGGTGATGACATTGTGTATGCCTCCATTAGCCGAGGCCGCCCCCACAGACAGTCTGGCAGGTCTGCTCGCAACAAGAACATGGAAAATGACGAGTATTGCATCTACGCCGTTGTGCAGACGTAGGAGCTGATTCTGTcggtgggggggcagagggaCGAGGAGACCCCCCCCTGCCCACCCCTGCCAGTACCAGTATTGACAGGGGGCACAACAGCATTAATATCCTGATATCAGCAGTGCAGAGACATCTCCAGAGAAAGAAGAGTACTGGTGAACAGGTTTAACACAGCTTCCTAACACAAAACAACTGATAAATGTGCTCTGGGCAAAGTGACCTCCCCATAAAGAGCCATCTTATCTGGACATTTGTCTACAATCTGTAGCTAGTATCATGGACcaaatgcttattttttcaaagcaaGAGAAATAAaggcagattttattttacagaagtaCAGTTCTGGAATTTAACAGGGACTACATTTAGGGACAGAAACCAAATGAGCAATGTTTGCACTGAAGCAAAAACCTTTGTATCCTGATGATGTAGTGTTTGGTAAAAGCAATATGACATCTTACCACCTGTTCATACTCAGCTTTTTAACAGGTGTAAAATCAACAGAAAAAGTGTCAAAGCAAAGCCAGAAAGAAACTATACTGTGTATTTTTACTGtatcaaaactttaaaaaaaaatcacaaattgtaaatgtaaatatttgcatgcactttttacttaaaatatgttataaTCTATAACCCCATTAGTTAAAATAACACAGTCATTGTGGTACTGAATGGCTTGTGCGTGTCAGGGAACAGTGGGAGGCAATGGGATTAACCTGGCTAATGACAGATTAATATGCCCTTTCACACAAGTGTCAAATAATCCATGTTAATgcttttaaagttatatatattttttttaatacagcaatgtagagcgagagagagacagagagatggagaggcaaggagacagaaagacagaggtCAGCTCTCTGGTCAGAATGTGGGTTTGGATGTGTTGCAAGaaacagaagaggaagaggatgagTGTTTCTGTCACTTCTTATTTACTCTAGTGGTTTTCCAACTGttagcatttacattttctatctGATCAGCTGCTTCTGCTGATAAAAGCTGATAAAACACACCAAAGCCTGCCTACAATCACAGGTCTGATCTTCAGCTCGCTTAGCTCTCTGTGGATTCAACCCCTCACTCTCTGGAGCACTGAACCCCCCCACCAGCTCTCGGTACAGGGATGCTGCGAATGTGAACCTGAAAGCACTTAATCTCAAAGCAAATTATCTCAGGGAAATGGCTTGAATTAGCTTGAACAATTACAGAGCAAGATTAAGATGACTCAGGACCGATCAACTGGTCAGCTCTGCTCTGTCAGAAGTCCATTCCCCTTCGGTTGGCTGTTATTGTGAAAGTATTGCTGGATGATGCTGATGTGTCACGGATTGAAcactgtgggagagagcagaAACAGGCCAAACACGCCAACAGTCGATGTAAGGGACTCCACACGCCTCTGTGGTACTGGAGGCCCTGTTGTGGCACAGGTGTTGCAGACAGGGTTATACTGTGAACAATTAAGGGTTCAAAAGTGTATAGACCAGAAGCACATCCCAAATCTTATGAGGTGCCTGGTAAATTGAGAGATCACCACATAATATACTGGGAATCAGCAGTGACTGTATTTCGgcatcttttttttctatttagataaatagatatttatttgttatttgaaaatgttaaaagtgctctccatgaaaaataacttaaataaaatactgtctCGCAAGACATTGAGctgtctgctgtgtgtttctggTGGGGTTTTCTTTTACCTTTGTAATGTAACAGCTGCATTCCTCTTATAGTTCTCTGcagcatgtattttattttattaaagtttaatgatattaacaaaataaaacaacagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015647 False 1056 mRNA 0.57 7 14780269 14795425
TU124033 True 2398 lncRNA 0.42 4 14778430 14782267

Neighbor

gene id symbol gene type direction distance location
AMCG00015644 NA coding downstream 102438 14672211 ~ 14675992 (-)
AMCG00015641 LOC107382365,LOC104937879,LOC102289392 coding downstream 258144 14517458 ~ 14520286 (-)
AMCG00015635 NA coding downstream 304328 14468361 ~ 14474102 (-)
AMCG00015632 NA coding downstream 332412 14445353 ~ 14446018 (-)
AMCG00015634 ran1,ran,LOC107588340 coding downstream 334272 14436478 ~ 14444158 (-)
AMCG00015649 NA coding upstream 125887 14921312 ~ 14928105 (-)
AMCG00015651 NA coding upstream 144621 14940046 ~ 14943540 (-)
AMCG00015652 NA coding upstream 153818 14949243 ~ 14955830 (-)
AMCG00015655 NA coding upstream 298695 15094120 ~ 15108025 (-)
AMCG00015658 NA coding upstream 440709 15236134 ~ 15244894 (-)
G99289 NA non-coding downstream 153944 14542961 ~ 14624486 (-)
G99296 NA non-coding downstream 174453 14538671 ~ 14603977 (-)
G99302 NA non-coding downstream 215204 14562178 ~ 14563226 (-)
G99217 NA non-coding downstream 314270 14458465 ~ 14464160 (-)
G99167 NA non-coding downstream 671985 14105454 ~ 14106445 (-)
G99341 NA non-coding upstream 45211 14840636 ~ 14840842 (-)
G99343 NA non-coding upstream 84335 14879760 ~ 14880075 (-)
G99390 NA non-coding upstream 85229 14880654 ~ 14881619 (-)
G99395 NA non-coding upstream 107276 14902701 ~ 14902927 (-)
G99396 NA non-coding upstream 110556 14905981 ~ 14907325 (-)
AMCG00015645 dtx4,dtx1,LOC108426833,LOC105020655,LOC106577571,LOC106608654,LOC107683563 other downstream 40156 14680794 ~ 14738274 (-)
AMCG00015642 LOC102792555 other downstream 200797 14570651 ~ 14577633 (-)
AMCG00015640 LOC103356187,LOC107382365,LOC107664566,LOC107551445,LOC107556825,LOC101483122,LOC102289392 other downstream 263151 14502764 ~ 14515279 (-)
G99286 NA other downstream 295522 14481194 ~ 14482908 (-)
G99213 NA other downstream 321735 14447711 ~ 14456695 (-)
G99426 NA other upstream 307192 15102617 ~ 15189394 (-)
AMCG00015659 NA other upstream 375190 15170615 ~ 15200791 (-)
AMCG00015660 NA other upstream 454476 15249901 ~ 15252721 (-)
G99454 NA other upstream 464036 15259461 ~ 15260484 (-)
AMCG00015666 NA other upstream 892217 15687642 ~ 15703290 (-)

Expression


Co-expression Network