AMCG00015651


Basic Information

Item Value
gene id AMCG00015651
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 14940046 ~ 14943540 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015651
ttttttttatctttttgcaGATCCTTTTAAGGGTATGTACTGTGTGCAATgagtttatattaaatatggaGCATCAGCCATCAGGTATTCTGTATTCTTAGCCATGAGAGACACACAGTATAGTTGAATCATTTCTGCTCTTGGAAAATAGTCCAGTGTTACCTCTTTGTCACTGTGTTCAGTGCTATTACCTCTCTCACTTTTTGTTCAGTGCTGTTACccctctgtgtcactgtgtgttcagtgctgttagctctctctctctctcactgtatgTTCAGTGCTGTTATCAGTCAGGCTATTGTCGATACAGGCCAGTCCTCTATCATATTGGACAGAGTGGCTCAGAATGTTTGGATGCCTTATTTAAATACcatatgttttaataacattgttttacttCTCATATTTTTTGCAGAGTTTTTTAGAGTGCTGATGAAGACTGAGGGAGAGTCTGTCACTTTCAAAGCCCCGGTGCAGAATGggctgttgacatggaatggagagtATATTGCAGAGGTGTCCAATGGGGACTGTACTGTATACAAAGAGCACTTTAAAGACAGAGTGGAGTGGAGGAACAATAAATTCAACATCAATGATTTAGTCTCAGCGGACAGCGGGACTTATAGAGTGAAAGACAATGATGGACAGAGGAGCGTCTCAGAATTTCACCTCTTTATGCGTGCCCCGGTGAAGAAAACTGAGGGGGACTCTGTCACCTTTGAAGCCCCGGTGTGGAATGGGGCCCTGAAATGGAAAGGGGAAGTGATTGCAGAGGTGTCCAGCGGGCAGTGTGTTGTCAAGAGTGGCCAATTCACAGGCCGAGTGGAGTGGAaagatacatttcaaatcaataatGTAAACGTAGGTGACAGTGGGGTCTACACAGTGCAAAACAAGGAAGGCCGGAAGACGTGCCGAGGGTTTGATCTGATTGTGCGTGGGGGTCAGGACCCACTGCACAGCCCACATGATGTCATTGTGATGTCACAGCTGGGTAAGAGCAGCACTGACTGCAGCACAAGGCCAGAACACAAGCCAGCCTCGGCCCAGGAACAAGTGGTAGACCAGttggACGAAGTGGAACTGGACTCTATACTTGCTGATACTGCTGAGACTTACTGATGATACAGCCAAATATACTAATCAGATTATCAACTTCCAAATGTGATTCATGATTGCTTATTTCATTTCAGTCTGTAGGCTGACAAACTTTTAAAgtcatatgtttgttttttgtatgcttTATGCTTTACAATTATGCATTGTTATGGTAGGGTAAATAATTTGAATCTGCACTGTTAAAGATTGAAGCCACTCCTGCACTTAGCTGTGTGTCATGTGTGTCCTGTTAGTGCAGCACTGCAGTGGAATCAGTATTATTCTCATTTTTATTCCTCCCCCCCCGCAGTGTGGTTATTTTCTGGGTGTTGCCATGACAGCAAAGTAGAATGCTGATGTATTCAGTGACAAATTGTGCCTCAGTGAAGGCCCAAAGCCTGCGGCCACACTGCACACCCTGTGGGACACTGGACACTGGACTCTGGGCTGCACGGTcctgccagtgtgtgtgttcacagggACCAGTGCTGTGGGCCGGGCCTGTACTTCTGTAGGACTGGTTTTGTGCTCAGATACACTCATAATATCTGCATCTGTACAGAAAATCACATTACAACTGGTGCCTGGAAAATCTCTTTCTTATCTCTATTtgttatgattgtttttttgcaaggatttgtacttttctattttttataagTATGTCTTACTATATCACACTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015651 True 1788 mRNA 0.44 5 14940046 14943540

Neighbor

gene id symbol gene type direction distance location
AMCG00015649 NA coding downstream 11941 14921312 ~ 14928105 (-)
AMCG00015644 NA coding downstream 264054 14672211 ~ 14675992 (-)
AMCG00015641 LOC107382365,LOC104937879,LOC102289392 coding downstream 419760 14517458 ~ 14520286 (-)
AMCG00015635 NA coding downstream 465944 14468361 ~ 14474102 (-)
AMCG00015632 NA coding downstream 494028 14445353 ~ 14446018 (-)
AMCG00015652 NA coding upstream 5703 14949243 ~ 14955830 (-)
AMCG00015655 NA coding upstream 150580 15094120 ~ 15108025 (-)
AMCG00015658 NA coding upstream 292594 15236134 ~ 15244894 (-)
AMCG00015662 NA coding upstream 394496 15338036 ~ 15339062 (-)
AMCG00015664 NA coding upstream 611625 15555165 ~ 15557776 (-)
G99396 NA non-coding downstream 32721 14905981 ~ 14907325 (-)
G99395 NA non-coding downstream 37119 14902701 ~ 14902927 (-)
G99390 NA non-coding downstream 58427 14880654 ~ 14881619 (-)
G99343 NA non-coding downstream 59971 14879760 ~ 14880075 (-)
G99341 NA non-coding downstream 99204 14840636 ~ 14840842 (-)
G99410 NA non-coding upstream 37751 14981291 ~ 14983572 (-)
G99411 NA non-coding upstream 49366 14992906 ~ 14996764 (-)
G99412 NA non-coding upstream 51998 14995538 ~ 15052530 (-)
G99424 NA non-coding upstream 109756 15053296 ~ 15181986 (-)
G99430 NA non-coding upstream 181095 15124635 ~ 15126671 (-)
AMCG00015647 NA other downstream 144621 14778430 ~ 14795425 (-)
AMCG00015645 dtx4,dtx1,LOC108426833,LOC105020655,LOC106577571,LOC106608654,LOC107683563 other downstream 201772 14680794 ~ 14738274 (-)
AMCG00015642 LOC102792555 other downstream 362413 14570651 ~ 14577633 (-)
AMCG00015640 LOC103356187,LOC107382365,LOC107664566,LOC107551445,LOC107556825,LOC101483122,LOC102289392 other downstream 424767 14502764 ~ 14515279 (-)
G99286 NA other downstream 457138 14481194 ~ 14482908 (-)
G99426 NA other upstream 159077 15102617 ~ 15189394 (-)
AMCG00015659 NA other upstream 227075 15170615 ~ 15200791 (-)
AMCG00015660 NA other upstream 306361 15249901 ~ 15252721 (-)
G99454 NA other upstream 315921 15259461 ~ 15260484 (-)
AMCG00015666 NA other upstream 744102 15687642 ~ 15703290 (-)

Expression


Co-expression Network