AMCG00015907


Basic Information

Item Value
gene id AMCG00015907
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 28863860 ~ 28870244 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015907
ATGCTGGCTTCATCTGGGGGAGACACGCACCTCAGCGGGGCTCATTCCGCCTCCCCGTCCCTGAGCTGCGCGCACGGTTACAGCCCCAGCGAGGGACTTTGCGCCGCGGCTGACCGACAGTTGTTGCGTGAGAGTTTGGCCGTAGTTGTGGACGGTGCGTTGTGGTCGGCCGGTCTTGGACTTCCCAGGGACAGCcagctgcgcagatctgcggccGGAGCGCAGTCCGGGCTGTCGGTTCAGCGCCGCCGCTTCGCCATGAAGAGGAGACAGAAGCGCGTCCTGCAGATGACCTTTCTGTTCATGGTGGCTTTGATCTTCTTGCCCAACATTGGCCTCTGGTCGCTTTACAAGGAGAAACACCTGATGAAGTCACCGGAGGCCGGGGAGCAGaCCAAATCAATCGATCGCTGCTTGGTTGCTCAAGCGTAG

Function

GO:

id name namespace
GO:0006486 protein glycosylation biological_process
GO:0005794 Golgi apparatus cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015907 True 432 mRNA 0.61 3 28863860 28870244

Neighbor

gene id symbol gene type direction distance location
AMCG00015906 si:ch211-15e22.3,galntl6,LOC107734540,LOC107598754,LOC106610159,LOC107676688 coding downstream 86799 28756095 ~ 28777061 (-)
AMCG00015905 galntl6,si:ch211-15e22.3,LOC107670789 coding downstream 208589 28646331 ~ 28655271 (-)
AMCG00015903 LOC106610173 coding downstream 231061 28618576 ~ 28632799 (-)
AMCG00015904 galnt7 coding downstream 255410 28590771 ~ 28608450 (-)
AMCG00015898 NA coding downstream 433369 28421004 ~ 28430491 (-)
AMCG00015909 NA coding upstream 249733 29119977 ~ 29127756 (-)
AMCG00015910 NA coding upstream 266175 29136419 ~ 29144911 (-)
AMCG00015920 uso1 coding upstream 723920 29594164 ~ 29619723 (-)
AMCG00015925 NA coding upstream 805313 29675557 ~ 29680079 (-)
AMCG00015924 NA coding upstream 810439 29680683 ~ 29696689 (-)
G101388 NA non-coding downstream 1194105 27669432 ~ 27669755 (-)
G101369 NA non-coding downstream 2093592 26768207 ~ 26770268 (-)
G101318 NA non-coding downstream 2288650 26574385 ~ 26575210 (-)
G101317 NA non-coding downstream 2289573 26574066 ~ 26574287 (-)
G101309 NA non-coding downstream 2338130 26523659 ~ 26525730 (-)
G101571 NA non-coding upstream 338053 29208297 ~ 29269160 (-)
G101660 NA non-coding upstream 710605 29580849 ~ 29638632 (-)
G101728 NA non-coding upstream 1105149 29975393 ~ 29975724 (-)
G101828 NA non-coding upstream 1465843 30336087 ~ 30339728 (-)
G101855 NA non-coding upstream 1876325 30746569 ~ 30746808 (-)
G101456 NA other downstream 606128 28161837 ~ 28257732 (-)
AMCG00015891 wdr17 other downstream 793984 28041563 ~ 28069876 (-)
AMCG00015892 spcs3,LOC106602378 other downstream 866183 27986755 ~ 27997677 (-)
G101067 NA other downstream 3862970 24992953 ~ 25000890 (-)
AMCG00015825 LOC106569940,LOC107700648,LOC107717728,LOC108274877,LOC107565247 other downstream 5117157 23743790 ~ 23746703 (-)
G101540 NA other upstream 233985 29104229 ~ 29106160 (-)
AMCG00015936 med28,LOC107702388 other upstream 1293029 30163273 ~ 30168350 (-)
AMCG00015942 NA other upstream 1523807 30394051 ~ 30396307 (-)
G101853 NA other upstream 1770950 30641194 ~ 30724429 (-)
AMCG00015950 tll1,LOC107745060 other upstream 2148367 31018611 ~ 31085062 (-)

Expression


Co-expression Network