AMCG00015924


Basic Information

Item Value
gene id AMCG00015924
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 29680683 ~ 29696689 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015924
GCGCTGACCAAAGACAATGACCGGCAAGGCTCATCACACCTCGATCAACATGACGGAGGAGGTCAGCACCAATGGCAACTCTGTGAGGACGTTTCCCACGCAGGACAACAAGGCCCCTCAAGGTTCCACAGTCAGCTTCCATAACATTCACTACAAGCTGGATCTCAAAACCGGGCCCCTGTGCCGAAGGAAGACCAGCACCAAAGAGATCTTGAACGACCTGAAGTTCCTGGACGTGTTGGCTGCAAGGAAAGATCCCTCTGGGCTCTCGGGTGAAGTGCTGATCGACGGGGCCCCACAGCCGCCCAACTTCAAGTGCATTTCCGGCTACGTTGTTCAGGTGGGGAATCAGATGATCCGCGGCATCTCGGGCGGAGAGCGCAAGAGGACCAACATCGGCATGGAGCTGATCATTGACCCACCCGTGCTGTTTCTGGATGAGCCGACGACTGGACTGGACGCCAGCACTGCCaactctgtgctgctgctgctcaagAGGATGTCCAGTCATGGCCGAAACATCATCCTGTCCATCCATCAGCCCAGGTATTCAATTTACCGGCTGTTTGACAGTCTGACTCTGCTGGTCAGCGGGAAGCTGGTGTACCACGGCCCGGCTCAGAGCGCCCTGGACTACTTTGCCAACATCGGGTATGTCTGTGAGCCACACAACAACCCAGCTGACTTCTTTTTGGACATCATCAACGGAAACTCCATCGCAGTGGCGCTGGCCAAGATACAGAATTCTGAAGACTTCGACATTGAGGAGCACAACACGTCGTCACAGAGCATTGAAGATCGCTTGGCGGAGGAGTACAGGAACTCGCAGTACTGCAGGGACACTAAAGCCGACCTGGACAAGATCCTGCAAGGAAAGCAGTACATCACCAAGCCTAAGTCCAGAACAATCACCTACGCCAATTCATTCTTTCACCAGCTGAAGTGGATTGGCGTTACCATTTTCCTGGCCCTGATTGTGGGGGCAATATTCTTTGGAATAAAAAATGATCAAAGTGGGATACAGAACAGAATGGGAGCGCTGTTCTTCATTGTGACGAACCAGTGCTTCAGCTCCGTCTCTTCCGCAGAGCTTTTCATTACGGAGAACAAACTCTTCGTGCACGAATACATCAGCGGCTACTACAGGCTGTCTGTGTATTTCCTCTCAAAGATGATGGCCGACATCTTCACCTTAAGGACAATTCCCGCCATCCTCTTCAGCTGCATCGCCTACTTTATGCTAGGGCTGAAGCACACAGTATCTGCCTTCTTCATATTCACCCTGACCGTGACTCTGGTGTCCTACACTGCCACGGCCATGACCCTCGCCATATCTGCCGGCCAGAGTGTGGTCGCCGTGGCCAATATCTTCATGACCATTAGCTTTGTATTCATGATGATCTTCTCGGGCCTCCTTGTCAACCTGCCCAGTATTATGGACTGGCTGGCCTGGTTTAAATACCTGAGCATCCCCCGCTATGGCCTAGCAgctCTGCAAGTGAATGAATTCGTTGGGCTCAATTTCTGTAACGACACCCTCGGCCCTGCCAGGAACTCTGAATTCCTGGAGAAGCAAGGCATCAAATACAGCAGCTGGGCATTGTGGGAGAACCACGTGGCCCTGGCGGTGATGACTGTGATTTTCCTGGCAATAGCCTATTTAAAGCTGCGCTTCATGAGGAAGTTCACATAG

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0017111 nucleoside-triphosphatase activity molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015924 True 1693 mRNA 0.53 13 29680683 29696689

Neighbor

gene id symbol gene type direction distance location
AMCG00015925 NA coding downstream 604 29675557 ~ 29680079 (-)
AMCG00015920 uso1 coding downstream 60960 29594164 ~ 29619723 (-)
AMCG00015910 NA coding downstream 535772 29136419 ~ 29144911 (-)
AMCG00015909 NA coding downstream 552927 29119977 ~ 29127756 (-)
AMCG00015907 NA coding downstream 810439 28863860 ~ 28870244 (-)
AMCG00015923 ppm1k coding upstream 9286 29705975 ~ 29722947 (-)
AMCG00015926 NA coding upstream 68719 29765408 ~ 29769425 (-)
AMCG00015927 slit2,LOC107700301,LOC107695646 coding upstream 80090 29776779 ~ 29826448 (-)
AMCG00015934 NA coding upstream 415868 30112557 ~ 30124600 (-)
AMCG00015933 NA coding upstream 454000 30150689 ~ 30161616 (-)
G101660 NA non-coding downstream 42051 29580849 ~ 29638632 (-)
G101571 NA non-coding downstream 411523 29208297 ~ 29269160 (-)
G101388 NA non-coding downstream 2010928 27669432 ~ 27669755 (-)
G101369 NA non-coding downstream 2910415 26768207 ~ 26770268 (-)
G101318 NA non-coding downstream 3105473 26574385 ~ 26575210 (-)
G101728 NA non-coding upstream 278704 29975393 ~ 29975724 (-)
G101828 NA non-coding upstream 639398 30336087 ~ 30339728 (-)
G101855 NA non-coding upstream 1049880 30746569 ~ 30746808 (-)
G101859 NA non-coding upstream 1058198 30754887 ~ 30760424 (-)
G101911 NA non-coding upstream 1195639 30892328 ~ 30970887 (-)
G101540 NA other downstream 574523 29104229 ~ 29106160 (-)
G101456 NA other downstream 1422951 28161837 ~ 28257732 (-)
AMCG00015891 wdr17 other downstream 1610807 28041563 ~ 28069876 (-)
AMCG00015892 spcs3,LOC106602378 other downstream 1683006 27986755 ~ 27997677 (-)
G101067 NA other downstream 4679793 24992953 ~ 25000890 (-)
AMCG00015936 med28,LOC107702388 other upstream 466584 30163273 ~ 30168350 (-)
AMCG00015942 NA other upstream 697362 30394051 ~ 30396307 (-)
G101853 NA other upstream 944505 30641194 ~ 30724429 (-)
AMCG00015950 tll1,LOC107745060 other upstream 1321922 31018611 ~ 31085062 (-)
AMCG00015955 klhl2,LOC107745059,LOC107548347,LOC107655955 other upstream 1474750 31171439 ~ 31193425 (-)

Expression


Co-expression Network