AMCG00015934


Basic Information

Item Value
gene id AMCG00015934
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 30112557 ~ 30124600 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015934
ATGGTGGGCGGGGTCCGTGACGTCACAGGCGGAAAAGGAAGCGCCACTTCTCGCGAGAGGACAGCAGCCGACGGGATCGTGTTTGAAAAGAGGCGCCGGGCTGCGGAGCGGGAGCGCAGGGCTGCAGAGATGACCGAATGCAAAGACATGGAGATTAAAGAGGCCTTTGAAAAGGCCCAGAGGGGTCACAACAACAAGGCTAAGCTGGTGgctgctttgaaaaacaaatacaacaagCTGGAAGACAAAACCATTTTCCACGAGGAGTTTGTGCATTATCTGAAGTTCCCTATGATCGTTTATAAGAGGGAGCCAGCTGTTGAAAACGTCATCGACTTTGTGGCAAAATTTGCAACCAGTTTTGACGTTCCTGCAGACACCGATGAAAGTGTGGAGGACGAGGATGAGGATGACAACCCCTTCCTGAGCTACCTGTTTGGTTTTCTGCTGGAGTCCCACGACGCCAGCAGCCACGCCGTCCGCTTCCGCGTCTGCCAGCTCGTGAACAAGCTGCTGGCCAACATGGGCGAGAACGCGCAGATCGACGACGACCTGTTCGACCGCATCCACGACACCATGTTGTACAGGGTGAAGGACAAGTTCCCCAACGTGCGCATCCAGGCGGCCCTGGCCATGGCTCGGCTGCAGGAGCCGCACAACGACGAGTGTCGCACCATCAGCGCCTACATGCTGATCCTCGGGAATGATTCGAACCCGGAGGTGAGGCGGGCCGTGCTGTCCTGCATCGCCCCCTGCGTGCGCACGCTGCCCGGAATCATCCAGCGCACCCGGGACGTGAAGGAGAGTGTCAGGAAGACGGCCTACCAGGTCCTGGCGGACAAGGTGCACATCAGAGCTCTGAGTATCGCACAGAGGGTGCACCTCCTGGAGCAGGGCCTGAACGACCGCTCAGAGGCGGTGAGGGAGGTGGTGCAGAAGAAGCTGCTGCAGGCCTGGCTGAAGCTCACGCAGGGCAACGTGCTGGAGTTGCTGCACAGCCTGGACGTGGAGAACTGCCAGGAGGCGGCCGTGAAGGCCCTGAACGCCATGTTCTCCCTGTCCCCTCTGGAGGACCTCCTCAAGGACTGCGGCAACTTGGACGCCAGGAAGCTGATCCCTGTCGCGGGCCTGACCTGCGAGAACGCGCTGTACTGGAGGGCTCTCTGCGAGTTCGTCCGCTCCCAGGGAGACGAGGGCGAGGAGCTGCTGGAGAGACTCGTACCCGAGCCGGCCATCTTTGCAGAGTACCTCTACGGGTACCTGAAAAGCATCCCGGTGCTGCACGAGCAGGAGAAGATGGATTTCACGCAGGTGGAGAACGTCATGACCAAGGAGTTCATCGGCCAGCAGCTGGTCCTGCTGGTGGGCTGTCTGGACACGACGGAGGAGGGCGGCAGGAAGCGTGTGCTGGCCGTGCTGCAGGAGACGCTGGCGCTGCCCAACATGCCCATGTCTCTGGTCTCGCTGCTGGTGGAGAGGCTGCTGTCCATCCTGAAGGATGACGACCACCGGGTGCAGCTGATCGCGGAGATCGTCTCTGACGTGCGAGAGCCCATCGTCGCGGTCGAGGCGCCAACCGATAAAAACGAGGCTAGAAAGCGCCAAATCAAGCTCGCCGAGATCAAAGTGAAGATGATTGAGGCCAAGCAGACACTGGAGGACTGTGTGGCGGCGCAGGACTTCTGCCGCGCCTCCGAGCTGAAGGACGAGATCCATGAGCTGGAGGCTCTCAGCAGGCAGTGGAGGAAGGAGGCGGAGGAGCCCGAGATTAAAGAAGTCCGCGTGGAGAAGAGCGACCCCGAGACCCTGCTGAAGTGTCTGACCATGTGCGCTGAGCTGCTGAAGAAGATGGCGATGGACAAGCGCCTGGGCCAGACGGTCAACAGCCTCCTGGAGTCCCTGatcCTGCCCAGTCTTGCCAACGCCCACCCCGCTGTGAGGAACATGGCTGTGGTGTGTCTGGGCACCTGTGCTCTCCACAGCCGGGACATCGCCAACAcgcacctgctgctgctgttacagATCGCCCAGCTGGACGAGCCCAAGATCAGGGTGAGCGCCCTGAAGGCCGTGATCGACCAGCTGCTGCTCAATGGCATGGATGCGGCGCAGGGCAGCCCCGCCACGACCGCCGGAGACGACGGCGCCGCCGCGGAGCCGCAGAGCGGAGAGGAGAACACGCACGGCATCCTGGCGCTGCTGTCGGGGTTCCTGGACAGCGAGATCCCGGAGCTGCGGACCGAGACGGCGGAGGGCTTGGCCAAGCTGATGTTCTGTGGACGGCTGACGAGCTCCAAGCTGCTCTCACGCCTCCTCCTGATGTGGTACAACCCCGTGACCGAGGACGACACCCGGCTGCGCCACTGCCTGGGCGTGTTCTTCCCCCTGTACGCCTATGCCAGCAGGTCCAACCAGGAGTGCTTCGAGGAGAGCTTCCTGCCCACCCTGCAGATCCTGTTTAACGCCCCCGCCACCTCCCCCCTGGCCGAGGTCGACACCTTGAACGTGGCCGAGCTGTTCGTGCTGACGGTGCACGACTCCCTCGCCCTCCGCCTGTGCAACGAGATGCTGAAGGACCCGACGGCCCCCGAGGTGCGGCTGTACGCCAAGTGCCTGACGCTTCTGGAGCTCGACGGCTCGGCGGCCAGCGAGGACTTGCTGTTGCTTCTGGGAGAAGTCCTGCGGGAGGTGAAGGACAGGGTGTGTCTGAGGGCCATCGAGAAGGTCGTCGGCCAGCtgaggggggaggagagggagaaggccGCTCTGAACGGCACCCAGAGCCAGGACGCCACGATGGCAGTGGACCGCACCGCTGTGGAGAACGGGGAAGAACTTCAGACTGATGGAAAGCAGTTAAACAAGACCGGAGCTAAAAGAGGGAGGAAAGCGGCTTCGACTGCAGCTCGGACCACGAGGAGCAGAGCGGCCAAAGCTGTGGAGGCAGCGGTGGAGAGCGACGGGGAGGAGAAGGTGGTCGTGACGCGGCCGTCGAGGAGGGCGAAGACCGCGGCGCTGGAGAAGACCAAGATGGACCTGACTGCTCTGCTCAACCTGGAAGCCACCGGGTCCTGAGTGCTGCCCGCGGGCCGCCGGTCCTCACCGC

Function

GO:

id name namespace
GO:0000070 mitotic sister chromatid segregation biological_process
GO:0000793 condensed chromosome cellular_component

KEGG:

id description
K06678 YCG1, CAPG; condensin complex subunit 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015934 True 3106 mRNA 0.62 23 30112557 30124600

Neighbor

gene id symbol gene type direction distance location
AMCG00015927 slit2,LOC107700301,LOC107695646 coding downstream 286109 29776779 ~ 29826448 (-)
AMCG00015926 NA coding downstream 343132 29765408 ~ 29769425 (-)
AMCG00015923 ppm1k coding downstream 389610 29705975 ~ 29722947 (-)
AMCG00015924 NA coding downstream 415868 29680683 ~ 29696689 (-)
AMCG00015925 NA coding downstream 432478 29675557 ~ 29680079 (-)
AMCG00015933 NA coding upstream 26089 30150689 ~ 30161616 (-)
AMCG00015935 LOC107550873,LOC107756464,LOC107680669,LOC107694980,LOC107601489 coding upstream 44111 30168711 ~ 30175061 (-)
AMCG00015939 LOC107591586,LOC104943831 coding upstream 229916 30354516 ~ 30364976 (-)
AMCG00015943 ndst3,LOC105903540,LOC107551574,LOC107754165,LOC107750457 coding upstream 275776 30400376 ~ 30419717 (-)
AMCG00015944 LOC108439183,LOC105903540,LOC107591550,LOC107750457,LOC108260488,LOC107551574 coding upstream 312897 30437497 ~ 30450154 (-)
G101728 NA non-coding downstream 136833 29975393 ~ 29975724 (-)
G101660 NA non-coding downstream 473925 29580849 ~ 29638632 (-)
G101571 NA non-coding downstream 843397 29208297 ~ 29269160 (-)
G101388 NA non-coding downstream 2442802 27669432 ~ 27669755 (-)
G101369 NA non-coding downstream 3342289 26768207 ~ 26770268 (-)
G101828 NA non-coding upstream 211487 30336087 ~ 30339728 (-)
G101855 NA non-coding upstream 621969 30746569 ~ 30746808 (-)
G101859 NA non-coding upstream 630287 30754887 ~ 30760424 (-)
G101911 NA non-coding upstream 767728 30892328 ~ 30970887 (-)
G101996 NA non-coding upstream 1699835 31824435 ~ 31824696 (-)
G101540 NA other downstream 1006397 29104229 ~ 29106160 (-)
G101456 NA other downstream 1854825 28161837 ~ 28257732 (-)
AMCG00015891 wdr17 other downstream 2042681 28041563 ~ 28069876 (-)
AMCG00015892 spcs3,LOC106602378 other downstream 2114880 27986755 ~ 27997677 (-)
G101067 NA other downstream 5111667 24992953 ~ 25000890 (-)
AMCG00015936 med28,LOC107702388 other upstream 38673 30163273 ~ 30168350 (-)
AMCG00015942 NA other upstream 269451 30394051 ~ 30396307 (-)
G101853 NA other upstream 516594 30641194 ~ 30724429 (-)
AMCG00015950 tll1,LOC107745060 other upstream 894011 31018611 ~ 31085062 (-)
AMCG00015955 klhl2,LOC107745059,LOC107548347,LOC107655955 other upstream 1046839 31171439 ~ 31193425 (-)

Expression


Co-expression Network