AMCG00015946


Basic Information

Item Value
gene id AMCG00015946
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 30749034 ~ 30766107 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015946
ATGGGCAAGGCTGTAATCATAGTGAACAGGATGAGCGAGAGACGCAGCCTCTTTGTGACGTCACAGGGTGTGGCCCGGTGGGCTGCACTCGCGCAGAGCTTCAGCGCCAGTCAGAGGCTCGAGTGTCCCCGGATCAGGATGAAGCTCAAGCCAGGAGTTTTTTTCCATTATCTGGAGCTGGACAGCACTTACAGTCTGCTGACAGTGAGGAGCGCGAACATACTGCTGCAGTATTTCAGGCTGCTGGACTTCTATCACTTCCTGAGGCATGTGAGTGACCTGAAGAAAAGAGAGATAATGCTGATCTTTGAGATGTTGGACCGCAACGCCTCCGGCGAGATCGGCTTCAATGAGTTCTACATGCTCGTGTGCATCCTGCTGGCTAACCAGAACCACATGGAGAAGGAATTCATATCACGGCATGCTTGTGCTATGTTCTCATTGATCGATGTGGATGGCAGCGGCGCCATCAGCCCGGCCGAGTTCCAGGCCATCAGCTTCCTCTTTAATATGAAAGGGGAGGACCTGAATAAGATCTTCCACGAATTTGATGTATCTGGGGACAAGATGCTGAGCTACACCGAGTTCAAGCTGTTTGCCCTGGAATGCATTGACATGCAGGAGGACACAGCAAAGAAGACTCCAACTTTGTTGAATCGCTTTCTGACGGTCTGCAAGGGAGCCTTTTGTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015946 True 693 mRNA 0.52 5 30749034 30766107

Neighbor

gene id symbol gene type direction distance location
AMCG00015945 NA coding downstream 276606 30465368 ~ 30472428 (-)
AMCG00015944 LOC108439183,LOC105903540,LOC107591550,LOC107750457,LOC108260488,LOC107551574 coding downstream 298880 30437497 ~ 30450154 (-)
AMCG00015943 ndst3,LOC105903540,LOC107551574,LOC107754165,LOC107750457 coding downstream 329317 30400376 ~ 30419717 (-)
AMCG00015939 LOC107591586,LOC104943831 coding downstream 384058 30354516 ~ 30364976 (-)
AMCG00015935 LOC107550873,LOC107756464,LOC107680669,LOC107694980,LOC107601489 coding downstream 573973 30168711 ~ 30175061 (-)
AMCG00015947 ugt8,LOC107591551,LOC107745064,LOC107656191,LOC106595509 coding upstream 37982 30804089 ~ 30823051 (-)
AMCG00015948 NA coding upstream 85714 30851821 ~ 30866786 (-)
AMCG00015951 LOC106594914 coding upstream 356561 31122668 ~ 31130956 (-)
AMCG00015952 NA coding upstream 384534 31150641 ~ 31154111 (-)
AMCG00015954 msmo1 coding upstream 397861 31163968 ~ 31171317 (-)
G101855 NA non-coding downstream 2226 30746569 ~ 30746808 (-)
G101828 NA non-coding downstream 409306 30336087 ~ 30339728 (-)
G101728 NA non-coding downstream 773310 29975393 ~ 29975724 (-)
G101660 NA non-coding downstream 1110402 29580849 ~ 29638632 (-)
G101571 NA non-coding downstream 1479874 29208297 ~ 29269160 (-)
G101911 NA non-coding upstream 126221 30892328 ~ 30970887 (-)
G101996 NA non-coding upstream 1058328 31824435 ~ 31824696 (-)
G102020 NA non-coding upstream 1186801 31952908 ~ 31953648 (-)
G102092 NA non-coding upstream 1596356 32362463 ~ 32362863 (-)
G102149 NA non-coding upstream 1764164 32530271 ~ 32530594 (-)
G101853 NA other downstream 24605 30641194 ~ 30724429 (-)
AMCG00015942 NA other downstream 352727 30394051 ~ 30396307 (-)
AMCG00015936 med28,LOC107702388 other downstream 580684 30163273 ~ 30168350 (-)
G101540 NA other downstream 1642874 29104229 ~ 29106160 (-)
G101456 NA other downstream 2491302 28161837 ~ 28257732 (-)
AMCG00015950 tll1,LOC107745060 other upstream 252504 31018611 ~ 31085062 (-)
AMCG00015955 klhl2,LOC107745059,LOC107548347,LOC107655955 other upstream 405332 31171439 ~ 31193425 (-)
G101939 NA other upstream 501297 31267404 ~ 31287793 (-)
G101963 NA other upstream 863141 31629248 ~ 31629566 (-)
AMCG00015962 NA other upstream 907377 31673484 ~ 31699506 (-)

Expression


Co-expression Network