AMCG00015947 (ugt8,LOC107591551,LOC107745064,LOC107656191,LOC106595509)


Basic Information

Item Value
gene id AMCG00015947
gene name ugt8,LOC107591551,LOC107745064,LOC107656191,LOC106595509
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 30804089 ~ 30823051 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015947
acacgcacacacactgacatactaacacactgactcacacaggTGTGAAACCTTGCTTTACTCTTTCTCTTTTCCCCCGTGTTCACTCCACAGCCATGAAGTTCAGCCCCGCTTTCGCTGCTGCCTTCCTGTGGCACGTTGCTGCTAGCCTGACCTGGGCTGCCAAAATCGTGATTGTGCCTCCTATCATGTTCGAGAGCCACCTGTACATATTTAAGACTGTGGCGGCCGCTCTGCACCGGGAGGGCCACGACACCGTGTTCCTGGTGTCCGAGGGCCGGGACGTGCCCCCATCCGAACACTACCGCCTGCAGCGCTACCCGGGCATCTTCAACAGCACCTCCGCGGACAACTTCCTGCAGTCTAAGATGAAGAACATCTTCTCCGGCCGCCTGACCGCCCTGGAGCTCTTTGATATCCTGGAGCACTACTCCCGGAACTGTGACGTCATGGTGGGCAGCGAGGCCGTCATGTCCCGGCTGCGGGAGGAGCGCTTCGACCTGCTGCTGGTCGACCCCAACGAGATGTGCGGCTTTGTGATCGCGCACCTGCTGGGCGTGCGGTACGCCGTGTTCAGCACCGGGCTCTGGTACCCGGCCGAGGTCGGGGCGCCGGCACCTCTGGTCTATGTCCCTGAGTTCAACTCCCTCCTGACAGACAGGATGACTCTCTTCCAAAGGATTACAAACACGGCCGTGTACGTGGTCTCGCGCTTCGGCGTGCAGTTCCTGGTACTACCCAAGTACGACCGGATAATGCAGAAGCACCACATACAGCCCGAGGTGTCCATGCACGACCTGGTGCAGGGGAGCCGCCTGTGGATGCTGTGCACCGACATGGCATTGGAGTTTCCCCGGCCCACCCTACCGCATGTGGTGTACGTTGGGGGGATCCTGACTAAACCTCCGAGCCCGCTCCCTGATGATTTTCTGTCGTGGGCCAACAGAGCCGAGGAGAACGGGTTTGTGCTCGTGTCGTTTGGTGCCGGTGTCAAGTACTTGTCTGACGATATCGCGAGGAAACTGGCTGGAGCTCTGGGCCGACTTCCTCAGAAGGTGATATGGAGGTTCAGGCAGCGTGCTCAGGTGCTGTCCAATATCCACAAGGACCAACCCGGACACCCCATCAGCCGCGCGGTCTACTGGATCAATTACATCCTCCGGCACGACGGCGCGGACCACCTGCGCTCCGCCGTCTACGAGGTCCCTTTCTACCAGTACTTTTTGCTCGACGTGGCAGCAGTGCTGACCCTCGCCATCCTCGCCATCCTCTACACCGTGTACCGGATAGCGAGACTGATCACGGCCAGGATGTGTCCCGCCTCGGTGGCGCTTAAGGCCAACGGACACTGTTACAACGGGATCCCCAACGGGAAGCACAAAAGGAACGGCCACATCAAGCACGACAAGAAGGTAAAATAGGAGCGTTCGCAGGCGCTCCGCTGGTGTGAAACTCAATGCAAGGGACAGCATCCGACATCTGTCATGCACTCGTAACAAAGCTGGTGTTTAAAGGGGTGGAGAAAAGTGAAGGTTaaagaggaaaggaaaacagTGATTCGGAGGCCAAAATCCATATCTAAAAATCACTCATTCaacttttttccttcagaaCACCTTTTCCTGTAGAAAACCCGACTTGTTGCGGCCGAGGCGAACAGGCGAGGTGTCTAACGAATGTCGACTCTGTCCTTGAAACTgagatttaataaattaatttaaattatctttttttttttttttaagtgatacTTTATAACATTAAACTACTGTACTGCTGAACATcaggtaaatatttaaaacagaaaaccaaatCTCTTCTATTTATTACTATTCCACTAATGtcctttaaaatatgttgttttggtTTGAGAAGCACactcccccccgccccacctgcatctgttagtttgttttattttttcactttttaaaaccCAAAAGGCcttcctttaaatatataccTGCTCCCAACCCCCTGACACAcaggtgcattgtgggtgtTCACGTGTTCTTGCAGCTACTAGGAGCCAACGACACTTGAATACATGGGATCCAACGAGAGAATCCACACTTTGCAGTAGCTGTAAAAATAGTGTTTTGCTACAGTTTTACACTGCATTTGTTAGAAGAAGAGTAAACCATCAATGAAATAGACGAGTGGTGTCTTACTGTGCACCACAGACGCAGCAATTTTACCTCATGTTTAAAACGATGCTACAAGTAGTTTAGGGGAAGATACGTTCGATAAAACTGTTCTAATCGTAGTAAATAACAAATGTCTCAGTCTGCATTGGGAACTGTCAATGTCTACCttgtatgtgtctgttttatAGAGTGAAAACTAGCAATAGTTAATCattgacatttcattttaacttattgcatttttgtaattgctACAGTTGTTTAAAACTGTCagtttttaacatattttcatGCGGTTATATAAGAATGGCTCTGCTGTTGTCCAGTACTTTGGCGTCAAGTTTCAGACGTTAAAGGAAAAAAGGACATTTTGAGAGATTACTTTCTTATACTTTTCAAGTTTCTTCTTTTGTATTGTGTCCCAGGTTGTTTGATGTACGCATGCTTTGCTTGACTTCATATCCCAATTATAGGTATGTGAATAAGTAAAATGCCCAATTTGTGCTGTGAACATACTCATATGTAAAGAATATCAGTCATAATAATAGACAAAATAGTTACTATTTTCATGTCAGTATGTTATATACACCAACTTTAAAAGCTGCATCTTTacaaaagccattttaaattatataaacataGAATCTaagtaaaagtaatattttatatttatataaatatatatatgtgtgtatgtatgtatatatatatatatatatatacatatacacacacatatagatatagacatatatatttatgtatgtaaattacatttttacagttaaaGAAAACTTGaatatgaaaggaaaacaaatctgaagtcTCTTTAGAAATgattgtgtgcaagtgtgtgtgtgttatattgtGTTAAACTAGGTTCGTTTCTGTCCTTAAGCTGCTTATGAATATAAAATCATGCCTAACTAatacttattaaaatgtacacaaaaatgtcttaaataaatacatatgaaaagaAAGATAAGAAAACAGTGAAGAAGCAACATTGACAAGgttatgtttatataaaatatcttATCAATAAAGTCTTAtgaataaatactattttaaccatttagaaataaatcaattggGATTAATAAAtctgtggaaataaatatatatgttttatgcaGTGATAATGCAGGGCAGCTTTATGTGTACGTTCCTGCCACTCCTGGGTGACAGTTCTGGTTCTGGATTCGGTCTAGAGTGATTGTAATCGGTGCCGAATAACTCTCAGCTGGTGGCTGGAGGCGGGTCAGATTGTTCCTTCGTGTCTGAGGGCTTCAATGCTAAGTACACATCTGACTCGAGGAAAACCGAAAAACGTCAAGTATTTTACAGATTCACCGTCACCAAGCTGCCTTGCTCAAAGAGGAAAAAGACCAAGTGAATTTTCCAGAACCACCCTCAGCAAAACATCTGGAGCCGAATGCACATTTTGCCGGGCGGTTTGTGGGTCATCAGGCACTGATCGATGCGCTTACatcaagtgttttttatttgcttagtttcaatttaaacaatgtttgtATTATATTCGCTTTCAGCTGCTCAGTTTGTGGTTTGATATTGGACATATTTCTGCTATCAGTCGGTCTAAACCGCTTGCGATGGCATGCGACTCTTCCTGCTTCCACATTCCTGAGGCTCACCTTCAGTACAATATCTCAGCTCCTCTTTCACAGGCGCTCACGCCCCCACGGCAGTCCCGTGGGTGCACGTGAACTCTCATCTCCCGGGCACAGGACACGGCTCTTGAACCTGGTGCGGGGCCTGACACCGCTGTGTCACAGAGCGACGGGGATGAATCGTCTTCTGTGCTCTGAAATGCTTTAACGCACACGGAGTGATCACAGGACTCCAGATGAGCGCTGGAGATTCCCCAGATTGAGTTAAGATCAATCGATTCATCCTGCGCTGCAACCGGGCATGACAGAGCCAGTATTGGGGGTCAGTAACGGTGAACTGTGATTGTAGCCCCCACAAATTGGGCATCCCAGAGTCGGCACATACTTGATGAATTGCCTGACCCAGACACAAACAGACCGCCCAGTAAAATGTGCTTTACACTCAGCTTGTGGCTCTGCTATACAACACTGTGCTGTCAAACGTATCTCCCTGAAACCCTTGTTACTGTCAATTGTTAACCCATTGGCTGCTGCTCTCCGCCTGCTCTGTGCGCTGTGTGTGACATCCTGGGCAGATTGAGTGGAGGCATGAAAATACTGATCTGGATCAATGAAAGATGcagcatgtttatttatatctctgtgattatttattttttatagagaAAAGTGTTGTTTGTTGCGTTCGTAAAGGGCATAAAGCCCACAGAAGAGATCATAACAGAAAATCCCATGAAGGTTAGCTACTGAAGTTGTCCTCTCTGCTCTGCGTTTTAAAATCGCTCGTATCCCAACCAGCTTTGAAGGTGTGGACCGTGTGCAACCACCTGCTTGATGTCTCGTGTGGTGTATGTAGAAATGTCATGTCTTTGCCaacattttgtgttgattttgtgtCTTTAAGTCATTAGAACCATAAATCATCTTGGCACAGAAGCTAGTGGTCTTGCTGTCGTCAGTTTCCCTTTTCAGATGAGGTTTGCGAAGGCTTGCCTGCCAGAGTGTCACACACATTGTGAATGTCCTGAAAAAAGCTCTTCTGTGGTTCAGGCCCAGCTGTCACTTTTCAATTTGCATAAGTGGTTCTGTGGTTTGGTTTTGGCTCCAAACTGATGAAAGGTGCGATAGATAGAgcggctgtgttgtgtttcagtcagaaccaaaataatgttgtgttgttgttttttctgtttttgtcatcTTGAATAAGCTTAATAAATGTTTCCTCTTCATAGGATTTCAAACCCTGggacactttttattttccgactttttaattttgtttttaatgcagctgATTTCCTTTGACTTTTTAAacgtttaaatgtttaaaagtgtTTACTTTTAGTTATTGCACTAAATCTTATAGAGACTATTTATGTGGTATTATAATACATGACTGACACGAGCTACGGGCCATACCGAATAAACTTTAATTGTGCTAAGTCAACACCTGCTTTTTCTGATCTACAAAAGCCTAacaaacatatatgtgtgtgtgtctgtgttaatCAACAAAACTGGAAGAAATACTATGGTAGAAAATACCATTTTATATCGATCTGtctatctgtatgtatgtatgtatgtatgtatgtatgtatatatggtgTTTTTCATCTATTCAAAAAGGGGTGGTCAACTTAACATGCTTTTAAAGTTTTACGAACATGGCCCTAAGCCTCTTTAATAAACTGAGGGGAAGCAATAATATACAtacctgtaaaaaaacaaatgacaaaacagaaacacacttgTGGCCTTGTCTTTGTAATATCATCTCACTATGAGCCTTGTTCAAACTAAAtctgcaacagcaacaacaaaaaagacttACTGTCGATACTTGAATAAGTGCATTTGAATTGAATCGCGCTTGCAGATGCATGTAGGCTATGAACAGAGAGATgagcaatacaataaataaaatcttgtgTACGAATGTGTCctggttgatgtttttttttcttataactTCAGTATTAATCATTCAAAGGGGTGAGCAGTTACAATGGTGCTACAAACAGCGCTTAAGAGCATAAGAAGTTGccttctctcttctctgtaCCATGTGACCACAGATGCCTGTCCGTCGCTCGGCTACACTGTTTCTTCCAGACAGCAATAGTCAGATAATCAAAGAAAGGAAGCAAACCAACATCCGGTCCATAGCGCTTGCTGTGGCCGAGCTGTGAGCTGAGCAGTGCCACCGCAGCGCCACCTCGTGGTCCCCAACGCCAAGCTGTCACACAAATCGGACTGTTGAATCGATTTCATGGGTGCTGGCtttggatttctttttctttttctttttctaattggTATCTGTTGATGTTTGTTCAGactgtaaatataatatgtaataattataatgcttataataaagaaaaataactaatgcttaataaacatttacatattttgtttgca

Function

symbol description
ugt8 Predicted to enable UDP-glycosyltransferase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in intracellular membrane-bounded organelle. Orthologous to human UGT8 (UDP glycosyltransferase 8).

NR:

description
PREDICTED: 2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016758 transferase activity, transferring hexosyl groups molecular_function

KEGG:

id description
K04628 CGT, UGT8; ceramide galactosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015947 True 6214 mRNA 0.43 3 30804089 30823051

Neighbor

gene id symbol gene type direction distance location
AMCG00015946 NA coding downstream 37982 30749034 ~ 30766107 (-)
AMCG00015945 NA coding downstream 331661 30465368 ~ 30472428 (-)
AMCG00015944 LOC108439183,LOC105903540,LOC107591550,LOC107750457,LOC108260488,LOC107551574 coding downstream 353935 30437497 ~ 30450154 (-)
AMCG00015943 ndst3,LOC105903540,LOC107551574,LOC107754165,LOC107750457 coding downstream 384372 30400376 ~ 30419717 (-)
AMCG00015939 LOC107591586,LOC104943831 coding downstream 439113 30354516 ~ 30364976 (-)
AMCG00015948 NA coding upstream 28770 30851821 ~ 30866786 (-)
AMCG00015951 LOC106594914 coding upstream 299617 31122668 ~ 31130956 (-)
AMCG00015952 NA coding upstream 327590 31150641 ~ 31154111 (-)
AMCG00015954 msmo1 coding upstream 340917 31163968 ~ 31171317 (-)
AMCG00015956 NA coding upstream 415956 31239007 ~ 31240666 (-)
G101859 NA non-coding downstream 43665 30754887 ~ 30760424 (-)
G101855 NA non-coding downstream 57281 30746569 ~ 30746808 (-)
G101828 NA non-coding downstream 464361 30336087 ~ 30339728 (-)
G101728 NA non-coding downstream 828365 29975393 ~ 29975724 (-)
G101660 NA non-coding downstream 1165457 29580849 ~ 29638632 (-)
G101911 NA non-coding upstream 69277 30892328 ~ 30970887 (-)
G101996 NA non-coding upstream 1001384 31824435 ~ 31824696 (-)
G102020 NA non-coding upstream 1129857 31952908 ~ 31953648 (-)
G102092 NA non-coding upstream 1539412 32362463 ~ 32362863 (-)
G102149 NA non-coding upstream 1707220 32530271 ~ 32530594 (-)
G101853 NA other downstream 79660 30641194 ~ 30724429 (-)
AMCG00015942 NA other downstream 407782 30394051 ~ 30396307 (-)
AMCG00015936 med28,LOC107702388 other downstream 635739 30163273 ~ 30168350 (-)
G101540 NA other downstream 1697929 29104229 ~ 29106160 (-)
G101456 NA other downstream 2546357 28161837 ~ 28257732 (-)
AMCG00015950 tll1,LOC107745060 other upstream 195560 31018611 ~ 31085062 (-)
AMCG00015955 klhl2,LOC107745059,LOC107548347,LOC107655955 other upstream 348388 31171439 ~ 31193425 (-)
G101939 NA other upstream 444353 31267404 ~ 31287793 (-)
G101963 NA other upstream 806197 31629248 ~ 31629566 (-)
AMCG00015962 NA other upstream 850433 31673484 ~ 31699506 (-)

Expression


Co-expression Network