G96452


Basic Information

Item Value
gene id G96452
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 5398094 ~ 5559599 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU120259
TTGATGATgagataattttattttgtttcttttctaagAAGAAGGAAACTGTACACCAGACTTGCTCAGGATGATTCTATAGTTCTGTCTGCACAGTCCTACAGTAAACTCCTCTAACACATCATTGGGCTGCTGTTGGCTAATTGTCTACAGAAGCAAGAATGTGTGAAGGAAGGTCTTGGCTCTCTCTTCTGATGGCTTAGTCACTGCAGGACAGAAGAAATGGNNNNNNNNNNNNNNNNGATGAGATTAAcatctttatttctgtttgttttgttatccaTTGTCCCTAGAGATGGGACCtcatgatgtattgattatttatggTCTGctgaaaatcaataaaaacatattgctaACAACacaatctttttcattttaagaatcATTTGTTTTGAGGTATCTCATTGTGGATTTTATTTCAGTGGCAGAGCTGCCTTCtggaagtgatgtcatttaaAACAGCTCCAGGAAAAAAggttggttattattatttttagtattattaaacACTGTTTTTAGGCTTGAGGACACTTGCAGCTCAATCCAAAGCAGCATCTGAAGGAGCCCATGTGTCTTCTGGTTGTCATCCCAGCTGAGGTCTTAATTGAATTCTTAACTGAACAACTGATAATTGTATTTCAGACTTGGCAGTTGTTCTCAGGCCTTAAATAGGTGGAGATCAGTAATGTCAGTGGGTgacatcaacaacaataacaataactggAGCTGGAATGAACGCCAGCCAGCCGGCAGACACTGGGAGCTTCTCCAGGATCAGTGCAGGGAGCCACTGGCTTAAAACTAACCATTGCtggaaaatatgaagaaaaatgtaaatacattcatGAATGAGTTAATGTGACTTGGATTAACTGTTATAGAGGGCCTCACCACTGAGGTAGGAAGTCCTCGGAAATCCAGGATTTGATGAACTCTGCAGTGGCAGCTGTCAGGAAGTTCTCCTTGGTCCTCAGGTCGTCTTTGGCCTCATTGTTGTAGGTGCCACACAGACCCTTCAGACCGCCCATCAGGAGGTTGGGCACAGTCACAGAGAGGTCGCCCATGGAGCTCAGATGCACCTCCTTCCCATCCTTCTCCATCACCACTGCCCCCTCTACCACCGACACTGCCAGCCCATTGGTTGCCTTCCAGGGCAGAGACACAGGCTGGCCATTCAcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120259 True 1182 lncRNA 0.43 2 5398094 5559599

Neighbor

gene id symbol gene type direction distance location
AMCG00015229 NA coding downstream 6753 5391018 ~ 5391341 (-)
AMCG00015232 NA coding downstream 7078 5388897 ~ 5391016 (-)
AMCG00015228 NA coding downstream 9218 5379521 ~ 5388876 (-)
AMCG00015231 NA coding downstream 38165 5358559 ~ 5359929 (-)
AMCG00015227 NA coding downstream 157059 5235132 ~ 5241035 (-)
AMCG00015243 NA coding upstream 132059 5691658 ~ 5694064 (-)
AMCG00015249 NA coding upstream 250435 5810034 ~ 5826236 (-)
AMCG00015248 NA coding upstream 269149 5828748 ~ 5843272 (-)
AMCG00015250 NA coding upstream 285577 5845176 ~ 5849429 (-)
AMCG00015247 NA coding upstream 305445 5865044 ~ 5880190 (-)
G96385 NA non-coding downstream 203956 5193823 ~ 5194138 (-)
G96375 NA non-coding downstream 240954 5156787 ~ 5157140 (-)
G96329 NA non-coding downstream 359603 5038290 ~ 5038491 (-)
G96318 LOC100846954 non-coding downstream 376029 5021260 ~ 5022065 (-)
G96314 NA non-coding downstream 381485 5016386 ~ 5016609 (-)
G96531 NA non-coding upstream 226798 5786397 ~ 5788847 (-)
G96532 NA non-coding upstream 232804 5792403 ~ 5792614 (-)
G96609 NA non-coding upstream 367860 5927459 ~ 6032127 (-)
G96642 NA non-coding upstream 559022 6118621 ~ 6119653 (-)
G96643 NA non-coding upstream 561055 6120654 ~ 6121002 (-)
AMCG00015211 NA other downstream 314907 4985572 ~ 5083187 (-)
AMCG00015210 NA other downstream 421744 4968050 ~ 4976350 (-)
AMCG00015203 NA other downstream 595190 4778393 ~ 4802904 (-)
G96191 NA other downstream 778830 4617711 ~ 4619264 (-)
G96094 NA other downstream 1217653 4174879 ~ 4180441 (-)
AMCG00015244 NA other upstream 193994 5753593 ~ 5757109 (-)
AMCG00015257 NA other upstream 465769 6025368 ~ 6072125 (-)
AMCG00015256 NA other upstream 489878 6049477 ~ 6064159 (-)
AMCG00015267 NA other upstream 809155 6368754 ~ 6384620 (-)
AMCG00015271 NA other upstream 851048 6410647 ~ 6419481 (-)

Expression


Co-expression Network