G98126


Basic Information

Item Value
gene id G98126
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 9929562 ~ 10017869 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU122394
ttttttgttttATCCCGTGCACTTTTTAAATAGGCTTTATTGTAACAGGCTCATCAGGAGCAAAAGAAAACATCGCAAGCGAAGAAAAATTCACCCCCCCCTCCAGAGGAAGCGAAGCGTGTGCGTCCGATTTTGTGGTCCTGCAGGAGAGGCGTCCGGAGACTGGAGAGGAGTAAACATCGGTCTGGAGGAGAGGTAGATGGAGGAAGAGGGCTGGTCCTCAGTCCTGGTCCGGTACAGTCCAGTCCACCTCAGTCACGCCTCTTGTAATTCTCCAGGTTGGCCAGAACCCAGCCAGACGGGCCCAGGATCGCAATAGACATGAGTCCCAATCCGATGGCAGTTTCC
>TU122395
aaactctcactctctctctctctctctctcccacactccCCAACACACCCTCACCCAGAGACGGCGAGATCCCGTGCACTTTTTAAATAGGCTTTATTGTAACAGGCTCATCAGGAGCAAAAGAAAACATCGCAAGCGAAGAAAAATTCACCCCCCCCTCCAGAGGAAGCGAAGCGTGTGCGTCCGATTTTGTGGTCCTGCAGGAGAGGCGTCCGGAGACTGGAGAGGAGTAAACATCGGTCTGGAGGAGAGGTAGATGGAGGAAGAGGGCTGGTCCTCAGTCCTGGTCCGGTACAGTCCAGTCCACCTCAGTCACGCCTCTTGTAATTCTCCAGGTTGGCCAGAACCCAGCCAGACGGGCCCAGGATCGCAATAGACATGAGTCCCAATCCGATGGCAGTTCAACGGCACCGATATTCTCCTTGGGCGGCTTGGTATACAGGCTAGCGCGCTGGACGACGGCGTGGCCTCGCAGGGCCGGAGCGGACCGGGCGGCCAGGATTCCTCGGACAAGCGCAGACATTGTGGGTGAGCTCTCAGTGTCAATCTGCCGGGAAGTCGCCGGATGCAGGGAGATAAAGGACGAGTCGCAGGATAATGACGTCATTGTATGCGTTGTTTCACTTTCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122394 False 348 lncRNA 0.53 3 9930341 10017869
TU122395 True 630 lncRNA 0.57 3 9929562 9930787

Neighbor

gene id symbol gene type direction distance location
AMCG00015470 NA coding downstream 20128 9899672 ~ 9909434 (-)
AMCG00015469 NA coding downstream 53048 9871748 ~ 9876514 (-)
AMCG00015454 NA coding downstream 159892 9756195 ~ 9769670 (-)
AMCG00015453 NA coding downstream 190247 9718458 ~ 9739315 (-)
AMCG00015452 rab1ba,LOC100695098,LOC103027853,LOC103373258,LOC101478491,LOC103148874,LOC107679256,LOC105022126 coding downstream 211482 9712438 ~ 9718080 (-)
AMCG00015486 NA coding upstream 65919 10083788 ~ 10100629 (-)
AMCG00015485 NA coding upstream 92526 10110395 ~ 10111184 (-)
AMCG00015487 NA coding upstream 104130 10121999 ~ 10128211 (-)
AMCG00015495 NA coding upstream 182911 10200780 ~ 10211282 (-)
AMCG00015496 NA coding upstream 235823 10253692 ~ 10259089 (-)
G98012 NA non-coding downstream 223531 9705727 ~ 9706031 (-)
G98006 NA non-coding downstream 247880 9681165 ~ 9681682 (-)
G97861 NA non-coding downstream 400409 9114016 ~ 9529153 (-)
G97906 NA non-coding downstream 545438 9383508 ~ 9384124 (-)
G97860 NA non-coding downstream 819512 9094155 ~ 9110050 (-)
G98163 NA non-coding upstream 8245 10026114 ~ 10075893 (-)
G98211 NA non-coding upstream 89364 10107233 ~ 10165397 (-)
G98216 NA non-coding upstream 155232 10173101 ~ 10222525 (-)
G98314 NA non-coding upstream 471710 10489579 ~ 10493106 (-)
G98399 NA non-coding upstream 690552 10708421 ~ 10708752 (-)
AMCG00015471 NA other downstream 33050 9878459 ~ 9896512 (-)
G98094 NA other downstream 90052 9837502 ~ 9839510 (-)
AMCG00015460 NA other downstream 114096 9808818 ~ 9815466 (-)
G97897 NA other downstream 573830 9353217 ~ 9355732 (-)
AMCG00015419 klc2,LOC107747958,LOC107728029,LOC106578016 other downstream 745156 9174843 ~ 9184406 (-)
AMCG00015479 NA other upstream 895 10018764 ~ 10026019 (-)
AMCG00015497 NA other upstream 170973 10188842 ~ 10193858 (-)
AMCG00015493 zbtb3,LOC107602571 other upstream 177695 10195564 ~ 10198654 (-)
G98269 taf6l other upstream 270157 10288026 ~ 10340868 (-)
AMCG00015501 NA other upstream 360416 10378285 ~ 10385379 (-)

Expression


Co-expression Network