Gene
RNA
| Item | Value |
|---|---|
| gene id | G98591 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 11547635 ~ 11547875 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: coiled-coil domain-containing protein 107-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU122994 | True | 241 | lncRNA | 0.46 | 1 | 11547635 | 11547875 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015541 | NA | coding | downstream | 225135 | 11271539 ~ 11322500 (-) |
| AMCG00015536 | NA | coding | downstream | 363745 | 11179092 ~ 11183890 (-) |
| AMCG00015533 | NA | coding | downstream | 540260 | 10997549 ~ 11007375 (-) |
| AMCG00015534 | NA | coding | downstream | 552750 | 10989882 ~ 10994885 (-) |
| AMCG00015530 | NA | coding | downstream | 562425 | 10977415 ~ 10985210 (-) |
| AMCG00015556 | NA | coding | upstream | 915181 | 12463056 ~ 12469988 (-) |
| AMCG00015560 | NA | coding | upstream | 933847 | 12481722 ~ 12507107 (-) |
| AMCG00015562 | NA | coding | upstream | 1025588 | 12573463 ~ 12574052 (-) |
| AMCG00015561 | NA | coding | upstream | 1075383 | 12623258 ~ 12640668 (-) |
| AMCG00015568 | NA | coding | upstream | 1216037 | 12763912 ~ 12779914 (-) |
| G98510 | NA | non-coding | downstream | 397771 | 11143518 ~ 11149864 (-) |
| G98399 | NA | non-coding | downstream | 838883 | 10708421 ~ 10708752 (-) |
| G98314 | NA | non-coding | downstream | 1054529 | 10489579 ~ 10493106 (-) |
| G98216 | NA | non-coding | downstream | 1325110 | 10173101 ~ 10222525 (-) |
| G98211 | NA | non-coding | downstream | 1382238 | 10107233 ~ 10165397 (-) |
| G98648 | NA | non-coding | upstream | 898123 | 12445998 ~ 12446953 (-) |
| G98649 | NA | non-coding | upstream | 899713 | 12447588 ~ 12447829 (-) |
| G98650 | NA | non-coding | upstream | 901421 | 12449296 ~ 12449821 (-) |
| G98651 | pcnx3,LOC107560657,LOC107715400 | non-coding | upstream | 904487 | 12452362 ~ 12452577 (-) |
| G98652 | pcnx3,LOC107560657 | non-coding | upstream | 904991 | 12452866 ~ 12453153 (-) |
| G98546 | NA | other | downstream | 130973 | 11414367 ~ 11416662 (-) |
| G98543 | NA | other | downstream | 161436 | 11353783 ~ 11386199 (-) |
| AMCG00015540 | NA | other | downstream | 202145 | 11332663 ~ 11345490 (-) |
| AMCG00015535 | NA | other | downstream | 286467 | 11185860 ~ 11261168 (-) |
| G98502 | NA | other | downstream | 302073 | 11014625 ~ 11245562 (-) |
| AMCG00015557 | map3k11,LOC101463885,LOC102206973,LOC102778058,LOC100707946 | other | upstream | 851858 | 12399733 ~ 12430648 (-) |
| AMCG00015598 | timm10,LOC107746912,LOC107674252,LOC107556822 | other | upstream | 1910252 | 13458127 ~ 13468822 (-) |
| AMCG00015606 | NA | other | upstream | 2123440 | 13671315 ~ 13845677 (-) |
| AMCG00015612 | zdhhc5a,zdhhc5 | other | upstream | 2286642 | 13834517 ~ 13864738 (-) |
| AMCG00015628 | NA | other | upstream | 2747093 | 14294968 ~ 14336329 (-) |
