G98836


Basic Information

Item Value
gene id G98836
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 13248836 ~ 13249283 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU123294
caccgatcagccataacattatgaccacctgcctaatattgtgtaggtcccccttttgccgccaaaacagccctgacccgtcgaggcatggactccactagacctctgaaggtgtgctgtggtatctggcaccaagacgttagcagcagatcctttaagtcctgtaagttgcgaggtgggacctccatggatcagacttgatcttggattgagatctggggaatttggaggccaagtcaacaccttgaactcgtgattcatcagaccaggccaccttcttccattgctccgtggtccagttctgatgctcacatgcccattgtaggcgctttcggcagtggacaggggtcagcatgggcaccctgactggtctgcggccacgcagccccatacgcaacaaactgcgatgcactgtgtgttctgacacctttctatcagaaccagcatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123294 True 448 lncRNA 0.53 1 13248836 13249283

Neighbor

gene id symbol gene type direction distance location
AMCG00015586 NA coding downstream 55355 13181838 ~ 13193481 (-)
AMCG00015582 NA coding downstream 140382 13098638 ~ 13108454 (-)
AMCG00015579 NA coding downstream 171081 13072507 ~ 13077755 (-)
AMCG00015578 NA coding downstream 193798 13039548 ~ 13055038 (-)
AMCG00015577 tmem17,LOC107753710,LOC107598907 coding downstream 212321 13032041 ~ 13036515 (-)
AMCG00015589 NA coding upstream 36187 13285470 ~ 13311221 (-)
AMCG00015594 NA coding upstream 112141 13361424 ~ 13364977 (-)
AMCG00015596 NA coding upstream 120120 13369403 ~ 13409708 (-)
AMCG00015593 LOC108268441,LOC105020884,LOC101159514,LOC107676536,LOC107741212,LOC105028768 coding upstream 175186 13424469 ~ 13424876 (-)
AMCG00015595 NA coding upstream 177573 13426856 ~ 13432356 (-)
G98671 NA non-coding downstream 724761 12523793 ~ 12524075 (-)
G98662 NA non-coding downstream 778396 12470098 ~ 12470440 (-)
G98658 NA non-coding downstream 790763 12457626 ~ 12458073 (-)
G98657 pcnx3,LOC108279110 non-coding downstream 792630 12455930 ~ 12456206 (-)
G98656 pcnx3,LOC106602984,LOC107715400 non-coding downstream 793981 12454625 ~ 12454855 (-)
G98844 NA non-coding upstream 11728 13261011 ~ 13262227 (-)
G98953 NA non-coding upstream 80609 13329892 ~ 13335929 (-)
G98950 NA non-coding upstream 147364 13396647 ~ 13416500 (-)
G98973 NA non-coding upstream 215575 13464858 ~ 13519520 (-)
G98993 NA non-coding upstream 289244 13538527 ~ 13540957 (-)
AMCG00015557 map3k11,LOC101463885,LOC102206973,LOC102778058,LOC100707946 other downstream 818188 12399733 ~ 12430648 (-)
G98546 NA other downstream 1832174 11414367 ~ 11416662 (-)
G98543 NA other downstream 1862637 11353783 ~ 11386199 (-)
AMCG00015540 NA other downstream 1903346 11332663 ~ 11345490 (-)
AMCG00015535 NA other downstream 1987668 11185860 ~ 11261168 (-)
AMCG00015598 timm10,LOC107746912,LOC107674252,LOC107556822 other upstream 208844 13458127 ~ 13468822 (-)
AMCG00015606 NA other upstream 422032 13671315 ~ 13845677 (-)
AMCG00015612 zdhhc5a,zdhhc5 other upstream 585234 13834517 ~ 13864738 (-)
AMCG00015628 NA other upstream 1045685 14294968 ~ 14336329 (-)
G99213 NA other upstream 1198428 14447711 ~ 14456695 (-)

Expression


Co-expression Network