G99165


Basic Information

Item Value
gene id G99165
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 14090037 ~ 14091815 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU123784
CTAGTAATTGcaataatataacattatgaTTGGACcaataaaaaaactaatgaaaatgaataaatacaaataaaataatggtttcCATCTCTCTCACCGTGTATTCCTGTAATGTTGATCAGGTCCACACAATATCCACTCAGGAGGTTAAGTCCAGTGGCTGCTCCCTTTGACACCACTCCCACTGCAGTCtgcacatactgacacacaacaccacATCACTACTGCAGTCtgcacatacGGACACACACCACATCACTACTGCagtctgcacaTACGGACACACACCACATCACTACTGCAGTCTGCACATACGGACACACACGTCACTATTGCTTTATGCCCATAttgacacacaacacattaataTCAACCTCAGAGGGGGGGGCAGAGTCTAAATCTGTAAAGTCAAAGATCAGGGATAATgattctcttcctcctctccacaCCAGGACACCTGttatctgcctgtctgtctgtctgtctgtctgtccgtccatcCGTCCACTGGGCAACTGAGGTCAACTGCTAAGAATAGCCCAGCACACTGCAGCCAGTCATGGTCTCTAACGCGCCGCGTCTGTGGCCGTCAGCGGTGtgagtgtagtgcagtgcaccCCCCACTCTGCCCTCACCTCCAGCCCGGAGTCCAGCATCTCTCCCCCGACCAGGCTCTCCGCCGCCCGCCGGGCCTGGCCGCACCCCTCGGTGAGCAGGTAGCGCAGCCCCTCCAGCGCCGGGGCCGAGCCGGCCGACTGCGACTCCCCGGCCCCGCGCTGCGCCCCCAGGCACAGCAGCGCCACGACGCACAGGGCGGCCCGACAAGGCGCCATCAAGGCGGGCACTAGTGTAGTGTGCAGCGGGGCGAGGGCGTCGGTGCGGCCGGTGGACTGCGCTTATTAGCCGGACAACGGCGGAGACACGGACTGTGATCGACGACGCTGTCCAAGAGCAGTGCCGTGTTAGGGCTGGATTTTCAGAAGTACCCTTTAGCACCTCAGCGTGTGTCCCCTGCAAGTGTTGAAATGAGTTTTTATATCCAAAATCGAAAGGTCATGCAATGCATAAAACAGAGGAAATCGCGATCTACCGATACGCGCGAATCAAAGAACATTAAAACACGGTTTATTTTGTTACCTTAGAAGTATGGCGGCCGGCTTGGGGACGGGTTTGAGCGCCAGGCAGCTCAAGGGGGTAGTTGAGTTTAGCGGAGACCCCGGGACACAGCACAGATGTCAGGCAtatttaaggaaattaaaaccGCGACCGTGTCTAAAAATAGACACTTTTTTAATGTGTCCCGATACAGAAGGCAGAGGGCGACTCGTTATTTTTAACccgaaaagaaagaaagaaagaagcgGTGACTTGATATAAGTGCTCCGGCTCTTCTCGACGTCTTATGAGGTTTTCCTTACAAAAACGCCTTTCATAAAGAAACGCACCGAGACTGGGCTGGCAAGCGTCAAGTTAGCTGAACGCAAGTCGCAAAACCGCACGGCAGGGCACGGGCATCCTCTGCAGGCGAGTGCGTGTCCGTCTCCGGGACTTCGGTGCTATTAAAGTGAGAGTTCACAACTTTAAAGTCTTTTTAAATATCGATGTAATGCCAGTTCTTCCCGGGCGCCCAACCCCGTCCGACCCGCTCCGCTCCGCCGCCGCA

Function

GO:

id name namespace
GO:1990351 transporter complex cellular_component
GO:0034702 ion channel complex cellular_component
GO:0034703 cation channel complex cellular_component
GO:0034704 calcium channel complex cellular_component
GO:0005891 voltage-gated calcium channel complex cellular_component
GO:1902495 transmembrane transporter complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123784 True 1663 lncRNA 0.53 3 14090037 14091815

Neighbor

gene id symbol gene type direction distance location
AMCG00015615 NA coding downstream 6015 14079494 ~ 14084022 (-)
AMCG00015614 NA coding downstream 13895 14057339 ~ 14076142 (-)
AMCG00015611 clp1,LOC107750374,LOC107680590,LOC107594950 coding downstream 220047 13865851 ~ 13869990 (-)
AMCG00015613 NA coding downstream 260315 13826977 ~ 13829722 (-)
AMCG00015604 NA coding downstream 329307 13754068 ~ 13760730 (-)
AMCG00015623 NA coding upstream 5610 14097425 ~ 14101752 (-)
AMCG00015620 NA coding upstream 22179 14113994 ~ 14118650 (-)
AMCG00015621 NA coding upstream 30651 14122466 ~ 14128364 (-)
AMCG00015624 NA coding upstream 55707 14147522 ~ 14154144 (-)
AMCG00015622 NA coding upstream 73883 14165698 ~ 14172599 (-)
G99063 NA non-coding downstream 51734 14034258 ~ 14038303 (-)
G99058 NA non-coding downstream 158915 13925248 ~ 13931122 (-)
G99055 NA non-coding downstream 171713 13918075 ~ 13918324 (-)
G99051 NA non-coding downstream 187723 13901356 ~ 13902314 (-)
G99049 NA non-coding downstream 205367 13883123 ~ 13884670 (-)
G99167 NA non-coding upstream 13639 14105454 ~ 14106445 (-)
G99217 NA non-coding upstream 366650 14458465 ~ 14464160 (-)
G99296 NA non-coding upstream 446856 14538671 ~ 14603977 (-)
G99289 NA non-coding upstream 451146 14542961 ~ 14624486 (-)
G99302 NA non-coding upstream 470363 14562178 ~ 14563226 (-)
AMCG00015612 zdhhc5a,zdhhc5 other downstream 225299 13834517 ~ 13864738 (-)
AMCG00015606 NA other downstream 244360 13671315 ~ 13845677 (-)
AMCG00015598 timm10,LOC107746912,LOC107674252,LOC107556822 other downstream 621215 13458127 ~ 13468822 (-)
AMCG00015557 map3k11,LOC101463885,LOC102206973,LOC102778058,LOC100707946 other downstream 1659389 12399733 ~ 12430648 (-)
G98546 NA other downstream 2673375 11414367 ~ 11416662 (-)
AMCG00015628 NA other upstream 203153 14294968 ~ 14336329 (-)
G99213 NA other upstream 355896 14447711 ~ 14456695 (-)
G99286 NA other upstream 389379 14481194 ~ 14482908 (-)
AMCG00015640 LOC103356187,LOC107382365,LOC107664566,LOC107551445,LOC107556825,LOC101483122,LOC102289392 other upstream 410949 14502764 ~ 14515279 (-)
AMCG00015642 LOC102792555 other upstream 478836 14570651 ~ 14577633 (-)

Expression


Co-expression Network