G99296


Basic Information

Item Value
gene id G99296
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 14538671 ~ 14603977 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU123979
tttttcttaatttaattgtattatttatttttatgattgatCTGAGACCAACACACATGTATCTATTTCTTAATATacgattatttgtattattgattattttgtatatattattgattCCTAAACGTATTGATTGGTCCTGATGCTGGCTGCCACCTTCAGACAGAAGGATACAGAAGGGAGAGCACAGAGCTGCAGTCTACACTGAAAACCTGTGATTTCTCCGGCCTCGGTACGCAATGATAATGCATTTGGGAGCATCCATATAAAGATACCATGTATTACACGTGATTGACAGCTCTTTTCGAGAATACATATTGTCATCCATAAAATACCTCTACGATAAATCACACGAAGaataacattgattttattatgaTACACAGCCCCTTGTATATTAATCTTTCCACATTTAAAGAATAGCCCTCAAATTCAATAAATTAGAAACGTTATTAAAGATGCAGCATTAAATAGTTAGCAGTTCTATAATGAATGGGGCTGGGTTGTAATTCTAGTTTCAAATTGATGGATTTGGATACAGAGTTCTATAACAAAGGTGACTGTATGTGGCatacagttatttaatataattgattgGATTTCAAAGGTCTAGAATAACATATCTTCagtacatatatgtgtgtgtgtaatccaGAGTTCaagaatacatttgattttaaagtgatttaatgTAGTGGTTCTAGCATTCAACAGATTACACCCCAGGGTTCAAGAATCAGATAGATTTACTAGAATGGCATGTTTTAGAACAAAACAGACTGAATATAATTTTGCGTTCTAGAATAAAATAGATTGCATTTAAGTTGAAGTTTTAGATTCTGGATAGCTCTTATATAAAATAGATTGAATTTGTTCTACAGCTGTAATATAAAATCAGTGCAGAGTTAATGTTGCATGGTGTCCAGTAGGTCAGTCActaacactctctctctctcagtgcagtgttaatgtactgtagtgtccagtcagtcagtgtctgtactgtattaactctctctctcagtgcagtgttaatgtactgtagtgtccagtcagtcagtgtgtctgtactgtattaaccctctctctctcagtgcagtgttaatgtactgtagtgtccagtcagtgtgtctgtactgtattaaccctctctctctcagtgcagtgttaatgtactgtagtgtccagtcagtcagtgtgtctgtactgtattaaccctctctctatattattattattattatcatcatcatcatctatcCACGTCTGTTTGcgaaattaataaatatcatactataaaatgtatgtgtaataaTAGAGGAACACGCGGTCGTACTGAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123979 True 1342 lncRNA 0.34 3 14538671 14603977

Neighbor

gene id symbol gene type direction distance location
AMCG00015641 LOC107382365,LOC104937879,LOC102289392 coding downstream 18385 14517458 ~ 14520286 (-)
AMCG00015635 NA coding downstream 64569 14468361 ~ 14474102 (-)
AMCG00015632 NA coding downstream 92653 14445353 ~ 14446018 (-)
AMCG00015634 ran1,ran,LOC107588340 coding downstream 94513 14436478 ~ 14444158 (-)
AMCG00015631 stx3,stx2,LOC103390944 coding downstream 104964 14420754 ~ 14433707 (-)
AMCG00015644 NA coding upstream 68234 14672211 ~ 14675992 (-)
AMCG00015649 NA coding upstream 317335 14921312 ~ 14928105 (-)
AMCG00015651 NA coding upstream 336069 14940046 ~ 14943540 (-)
AMCG00015652 NA coding upstream 345266 14949243 ~ 14955830 (-)
AMCG00015655 NA coding upstream 490143 15094120 ~ 15108025 (-)
G99217 NA non-coding downstream 74511 14458465 ~ 14464160 (-)
G99162 NA non-coding downstream 319887 14062419 ~ 14218784 (-)
G99167 NA non-coding downstream 432226 14105454 ~ 14106445 (-)
G99165 NA non-coding downstream 446856 14090037 ~ 14091815 (-)
G99063 NA non-coding downstream 500368 14034258 ~ 14038303 (-)
G99332 NA non-coding upstream 184942 14788919 ~ 14789198 (-)
G99341 NA non-coding upstream 236659 14840636 ~ 14840842 (-)
G99343 NA non-coding upstream 275783 14879760 ~ 14880075 (-)
G99390 NA non-coding upstream 276677 14880654 ~ 14881619 (-)
G99395 NA non-coding upstream 298724 14902701 ~ 14902927 (-)
AMCG00015640 LOC103356187,LOC107382365,LOC107664566,LOC107551445,LOC107556825,LOC101483122,LOC102289392 other downstream 23392 14502764 ~ 14515279 (-)
G99286 NA other downstream 55763 14481194 ~ 14482908 (-)
G99213 NA other downstream 81976 14447711 ~ 14456695 (-)
AMCG00015628 NA other downstream 202342 14294968 ~ 14336329 (-)
AMCG00015612 zdhhc5a,zdhhc5 other downstream 673933 13834517 ~ 13864738 (-)
AMCG00015645 dtx4,dtx1,LOC108426833,LOC105020655,LOC106577571,LOC106608654,LOC107683563 other upstream 76817 14680794 ~ 14738274 (-)
AMCG00015647 NA other upstream 174453 14778430 ~ 14795425 (-)
G99426 NA other upstream 498640 15102617 ~ 15189394 (-)
AMCG00015659 NA other upstream 566638 15170615 ~ 15200791 (-)
AMCG00015660 NA other upstream 645924 15249901 ~ 15252721 (-)

Expression


Co-expression Network