G101853


Basic Information

Item Value
gene id G101853
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 30641194 ~ 30724429 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU127206
atcctatccagtctgtttttgaatgttcccaaatcgtctcttcagccacatcgctggggagtttgttcagattgtgacgcctctctgtgtgaagaagtgtctcctgttttctgtcttgaatgccttgaagcccaatttccatttgtgtccccgggtgcgtgtgtccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttggatcaagtccccacgtagtctcctctgttccagggtgaaaaggttcagttccctcagtctctcagtaggactttcccttcagacctggaataagtctggttgctctcctctgaactgcct
>TU127207
atcctatccagtctgtttttgaatgttcccaaatcgtctcttcagccacatcgctggggagtttgttcagattgtgacgcctctctgtgtgaagaagtgtctcctgttttctgtcttgaatgccttgaagcccaatttccatttgtgtccccgggtgcgtgtgtccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttggatcaagtccccacgtagtctcctctgttccagggtgaaaaggttcaggtccctcagtctctcagtaggacgttcccttcagacctggaataagtctggttgctctcctctgaactgcctctataGCAGCGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127206 False 351 TUCP 0.48 2 30719821 30724429
TU127207 True 364 TUCP 0.49 2 30641194 30724429

Neighbor

gene id symbol gene type direction distance location
AMCG00015945 NA coding downstream 168766 30465368 ~ 30472428 (-)
AMCG00015944 LOC108439183,LOC105903540,LOC107591550,LOC107750457,LOC108260488,LOC107551574 coding downstream 191040 30437497 ~ 30450154 (-)
AMCG00015943 ndst3,LOC105903540,LOC107551574,LOC107754165,LOC107750457 coding downstream 221477 30400376 ~ 30419717 (-)
AMCG00015939 LOC107591586,LOC104943831 coding downstream 276218 30354516 ~ 30364976 (-)
AMCG00015935 LOC107550873,LOC107756464,LOC107680669,LOC107694980,LOC107601489 coding downstream 466133 30168711 ~ 30175061 (-)
AMCG00015946 NA coding upstream 24605 30749034 ~ 30766107 (-)
AMCG00015947 ugt8,LOC107591551,LOC107745064,LOC107656191,LOC106595509 coding upstream 79660 30804089 ~ 30823051 (-)
AMCG00015948 NA coding upstream 127392 30851821 ~ 30866786 (-)
AMCG00015951 LOC106594914 coding upstream 398239 31122668 ~ 31130956 (-)
AMCG00015952 NA coding upstream 426212 31150641 ~ 31154111 (-)
G101828 NA non-coding downstream 301466 30336087 ~ 30339728 (-)
G101728 NA non-coding downstream 665470 29975393 ~ 29975724 (-)
G101660 NA non-coding downstream 1002562 29580849 ~ 29638632 (-)
G101571 NA non-coding downstream 1372034 29208297 ~ 29269160 (-)
G101388 NA non-coding downstream 2971439 27669432 ~ 27669755 (-)
G101855 NA non-coding upstream 22140 30746569 ~ 30746808 (-)
G101859 NA non-coding upstream 30458 30754887 ~ 30760424 (-)
G101911 NA non-coding upstream 167899 30892328 ~ 30970887 (-)
G101996 NA non-coding upstream 1100006 31824435 ~ 31824696 (-)
G102020 NA non-coding upstream 1228479 31952908 ~ 31953648 (-)
AMCG00015942 NA other downstream 244887 30394051 ~ 30396307 (-)
AMCG00015936 med28,LOC107702388 other downstream 472844 30163273 ~ 30168350 (-)
G101540 NA other downstream 1535034 29104229 ~ 29106160 (-)
G101456 NA other downstream 2383462 28161837 ~ 28257732 (-)
AMCG00015891 wdr17 other downstream 2571318 28041563 ~ 28069876 (-)
AMCG00015950 tll1,LOC107745060 other upstream 294182 31018611 ~ 31085062 (-)
AMCG00015955 klhl2,LOC107745059,LOC107548347,LOC107655955 other upstream 447010 31171439 ~ 31193425 (-)
G101939 NA other upstream 542975 31267404 ~ 31287793 (-)
G101963 NA other upstream 904819 31629248 ~ 31629566 (-)
AMCG00015962 NA other upstream 949055 31673484 ~ 31699506 (-)

Expression


Co-expression Network