Gene
RNA
| Item | Value |
|---|---|
| gene id | G101996 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030132.1 |
| NCBI id | CM030132.1 |
| chromosome length | 32980562 |
| location | 31824435 ~ 31824696 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU127388 | True | 262 | lncRNA | 0.42 | 1 | 31824435 | 31824696 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00015961 | NA | coding | downstream | 58069 | 31747028 ~ 31766366 (-) |
| AMCG00015958 | fstl5 | coding | downstream | 233627 | 31585936 ~ 31590808 (-) |
| AMCG00015957 | NA | coding | downstream | 304718 | 31488157 ~ 31519717 (-) |
| AMCG00015956 | NA | coding | downstream | 583769 | 31239007 ~ 31240666 (-) |
| AMCG00015954 | msmo1 | coding | downstream | 653118 | 31163968 ~ 31171317 (-) |
| AMCG00015963 | NA | coding | upstream | 30926 | 31855622 ~ 31873893 (-) |
| AMCG00015971 | etfdh,LOC102777291,LOC106604511,LOC107758565,LOC104941522,LOC102789087 | coding | upstream | 163591 | 31988287 ~ 31993019 (-) |
| AMCG00015972 | NA | coding | upstream | 173427 | 31998123 ~ 32026975 (-) |
| AMCG00015970 | NA | coding | upstream | 240801 | 32065497 ~ 32072955 (-) |
| AMCG00015973 | NA | coding | upstream | 252531 | 32077227 ~ 32078059 (-) |
| G101911 | NA | non-coding | downstream | 853548 | 30892328 ~ 30970887 (-) |
| G101859 | NA | non-coding | downstream | 1064011 | 30754887 ~ 30760424 (-) |
| G101855 | NA | non-coding | downstream | 1077627 | 30746569 ~ 30746808 (-) |
| G101828 | NA | non-coding | downstream | 1484707 | 30336087 ~ 30339728 (-) |
| G101728 | NA | non-coding | downstream | 1848711 | 29975393 ~ 29975724 (-) |
| G102020 | NA | non-coding | upstream | 128212 | 31952908 ~ 31953648 (-) |
| G102092 | NA | non-coding | upstream | 537767 | 32362463 ~ 32362863 (-) |
| G102149 | NA | non-coding | upstream | 705575 | 32530271 ~ 32530594 (-) |
| G102234 | NA | non-coding | upstream | 840076 | 32664772 ~ 32681331 (-) |
| G102237 | NA | non-coding | upstream | 873331 | 32698027 ~ 32698376 (-) |
| AMCG00015960 | NA | other | downstream | 107105 | 31707378 ~ 31717330 (-) |
| AMCG00015962 | NA | other | downstream | 124929 | 31673484 ~ 31699506 (-) |
| G101963 | NA | other | downstream | 194869 | 31629248 ~ 31629566 (-) |
| G101939 | NA | other | downstream | 536642 | 31267404 ~ 31287793 (-) |
| AMCG00015955 | klhl2,LOC107745059,LOC107548347,LOC107655955 | other | downstream | 631010 | 31171439 ~ 31193425 (-) |
| G102017 | rapgef2,LOC102783712 | other | upstream | 83793 | 31908489 ~ 31945175 (-) |
| AMCG00015965 | NA | other | upstream | 129950 | 31954646 ~ 31970287 (-) |
| AMCG00015979 | NA | other | upstream | 562217 | 32386913 ~ 32390012 (-) |
| AMCG00015984 | gucy1b3,gucy1a3,LOC107572203 | other | upstream | 598432 | 32423128 ~ 32446965 (-) |
| AMCG00015985 | gucy1a3 | other | upstream | 624804 | 32449500 ~ 32456878 (-) |
