AMCG00016041


Basic Information

Item Value
gene id AMCG00016041
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 3463666 ~ 3475993 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016041
ATGGGTGCCTATGGGTCGACCACTGACGACATCATGGCAGTGGACATGCACCACTGGTACAACAAGTTCATGCGGGAGTCTCCCTCGGGCCTCATCACCTTGTATGAACTCAAAGCCATCCTGGGGCTACAGGGAATGAATGAAGAAGCCACAGGATATATCGATCAGGTGTTCCACACGTTTGACATGAATGGGGATGGTTTTATAGACTTTGTGGAATACATTGCAGCCCTCAGTTTAGTATTAAAAGGAGAAATCAACCAGAAACTCAAGTGGTATTTCAAGCTCTATGATGCTGACGGAAATGGAAAAATTGACCGGGAAGAACTTCAAACCATATTTAAggcAGTACAAGACATCAATCGACATTATGACATGGCCCCCGAGGAAATCACAAACATGATATTTGATAAAATAGATGTGAATGGAGATGGGGAGTTGACGTTAGAGGAGTTCATTGCTGGTGCTCGACAGCATCCCATTATAATggatacaattacaaaaactcTCGACCTGTCCCATGTCCTCAAGGTCATTGTAAAAGGGAGGCGGAATAGCATCTGA

Function

GO:

id name namespace
GO:0031284 positive regulation of guanylate cyclase activity biological_process
GO:0005509 calcium ion binding molecular_function
GO:0008048 calcium sensitive guanylate cyclase activator activity molecular_function

KEGG:

id description
K08328 GUCA1; guanylate cyclase activator 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016041 True 564 mRNA 0.44 4 3463666 3475993

Neighbor

gene id symbol gene type direction distance location
AMCG00016028 timm10b coding downstream 747814 2714969 ~ 2715852 (-)
AMCG00016027 NA coding downstream 791957 2606708 ~ 2671709 (-)
AMCG00016026 NA coding downstream 863189 2596014 ~ 2600477 (-)
AMCG00016022 NA coding downstream 936389 2519543 ~ 2527277 (-)
AMCG00016023 NA coding downstream 948586 2463071 ~ 2515080 (-)
AMCG00016042 NA coding upstream 21709 3497702 ~ 3502851 (-)
AMCG00016047 NA coding upstream 146925 3622918 ~ 3668558 (-)
AMCG00016045 NA coding upstream 307541 3783534 ~ 3784496 (-)
AMCG00016050 NA coding upstream 347258 3823251 ~ 3835355 (-)
AMCG00016048 NA coding upstream 452741 3928734 ~ 3947435 (-)
G10556 NA non-coding downstream 85081 3378378 ~ 3378585 (-)
G10548 NA non-coding downstream 91768 3371541 ~ 3371898 (-)
G10529 NA non-coding downstream 182473 3280490 ~ 3281193 (-)
G10486 NA non-coding downstream 378129 3085303 ~ 3085537 (-)
G10483 NA non-coding downstream 415797 3040371 ~ 3047869 (-)
G10592 NA non-coding upstream 14765 3490758 ~ 3547091 (-)
G10596 NA non-coding upstream 38446 3514439 ~ 3522035 (-)
G10624 NA non-coding upstream 265600 3741593 ~ 3742262 (-)
G10673 NA non-coding upstream 393731 3869724 ~ 3912272 (-)
G10692 NA non-coding upstream 495893 3971886 ~ 3973511 (-)
G10478 NA other downstream 428483 3034422 ~ 3035183 (-)
AMCG00016029 NA other downstream 617309 2784125 ~ 2846357 (-)
G10420 LOC101154678 other downstream 752981 2710399 ~ 2710685 (-)
AMCG00016024 ilk,LOC106581335 other downstream 908720 2532617 ~ 2554946 (-)
AMCG00016046 NA other upstream 52849 3528842 ~ 3542536 (-)
AMCG00016049 NA other upstream 410305 3886298 ~ 3920503 (-)
AMCG00016074 NA other upstream 1427863 4903856 ~ 4929900 (-)
AMCG00016110 ufm1,LOC107701138 other upstream 4204918 7680911 ~ 7753437 (-)
AMCG00016119 NA other upstream 4643228 8119221 ~ 8124033 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location