AMCG00016146


Basic Information

Item Value
gene id AMCG00016146
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 9461493 ~ 9464391 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016146
AATGTACATGGTTAGATTGACGTGAAGGAAGCACTGCAGAACTGGGCAAATGAAACGGGGTTTGAAATGTGTGTTGATGGCCGGAGATTCAAACCAGCCTGGACGAACACCTGCTTCATGCTGAAATGCCACTCTGACGCCCTCTTCGACTTCCCATTTTGGCTTGGCTTCAGCAACCACAAGTTCAAGCTTCTTGGAATGGGTTCTCGCCTCACCTGTGGGCATAAAGGAGAGGAGATCGCAGAGAAAGCAGGTCTTTTGACTTCCTCCAACCTAGCAGTGCACAAGAACATTAAAGACTCTCCCAGCGGATTGGCTGATTTTAGACTGCTTTCTTGAACAAAAACCACTGTTTGTCAGTTATGTTTTACAGCATGGGTGCCCACTTCAGAAACATGCATTAGTTAGCACCTGCTTCCAACCTGCCAGCTGCTGCCAGCCTATATATTCAAGAGGTTTAAAGGATCGTTTGGACTGGGCTTAACCTTTAACACAAAGGTAGTTTTTCAAACAAGGCTCCTAGCCAAGCAATCCCTTTCTGTCTCCCTGATCTTATGCGTCTATATCGGGAATCTCTTGCTGTTATCCTGGAGATCTGTGGTGCATTCTGGTTATTATTCCAGCTTTTCAAAATCTCTCTCCATGGATTTTTTAAaggtgtatattttttaatcaaaccacTCCTGTTCTTCTACTACCCTCTGCTGGTCAAATAGGGCAATAAACAGCTCCCCTGTGGTTGTAATCTACGACCAAGTTCTCTCAATGTTGGCAGCTAAAATGAAACTGCTTGAAATGTTGCACTAGGACATCACGTATGGATCAAATGAGAGTTGGATGCCATTATTCTACTGTGTGCTTGTTTGAAAATAGATTGAATAACTTGTTGAAGTCTCTTGAAACTGTACAGCACATTTAGAACATATGCttcatataaataatgtgtGGTTCAGTTGGCTCAAACCACAATCAGTCTCACATCTGCAGCAACAGCTGTATTGAAGCCCAATCAATTGCACTCTCATTCAGCTTCATCATAATAGAAGAACCACCGTTGTATTGCTCCATATTGACCAGCAGACCCCAGCAGTGCCAGGGTTGGGGGGTAGAGTGGTTtggctttttaaatgtcattttaaagtatgtttaTCTGTaacctgttttctgtttttgcctTAACTGTCATCCATTATATTTGTCTAAACCTCTTTTACAACTTTTTGAGCATTTGCGTTTAAGAGGGCACTGATAATAAGAAACGGACACTTCCTGCTGATGGTCATTTTcgagaaaatgttaaaagaaatCAGATGAATGTGTTGTTCCTCTGTTTCATGTCTGACCAGAGCGACTTGTTTAACCACAAGGTGGCGATGTTTGATTAATGTGGTGTCATTGTTCGGACAGAAACATGTACCTCGTTTTGATTGGGCCTGCTTAGAGATTACTACTTATTTAAGGCTATTGTTTCCACATGCTTTACCAAAACAACTATTTTGTGAATACaatggtgaaaataaatgttgggCTGTATATGCTATTGGATAAATAGCTTGGGTTAAGTAAGGAcatgccatgttttattttatttatttatttatttattttattaatttaacttgcaAATATAAAGTGAGCAGCTGTACAAAGTTTTTGCTCACACAATCAGTCTGGCAACAGCTACAGGCTCGCCTCCATGCTTAGGAAGCTCTGTaatcactatatattttttatcctATTAAGGGCCTAGTTATTGCGGTCATTTATTAGTGGATCTGTGTTGTGGCTCTGCCCTCATAGTGCACCACTATATATCCACTGTTGTACAAGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016146 True 1833 mRNA 0.40 2 9461493 9464391

Neighbor

gene id symbol gene type direction distance location
AMCG00016153 NA coding downstream 4948 9452820 ~ 9456545 (-)
AMCG00016149 NA coding downstream 19754 9432630 ~ 9441739 (-)
AMCG00016154 NA coding downstream 34249 9420129 ~ 9427244 (-)
AMCG00016155 NA coding downstream 44768 9416522 ~ 9416725 (-)
AMCG00016152 NA coding downstream 50926 9406302 ~ 9410567 (-)
AMCG00016150 NA coding upstream 3955 9468346 ~ 9475518 (-)
AMCG00016147 NA coding upstream 14399 9478790 ~ 9489618 (-)
AMCG00016162 NA coding upstream 211547 9675938 ~ 9683998 (-)
AMCG00016161 NA coding upstream 219775 9684166 ~ 9685154 (-)
AMCG00016166 NA coding upstream 242880 9707271 ~ 9711998 (-)
G11571 NA non-coding downstream 147046 9314000 ~ 9314447 (-)
G11482 NA non-coding downstream 402393 9055904 ~ 9059100 (-)
G11346 NA non-coding downstream 1129690 8326182 ~ 8331803 (-)
G11345 NA non-coding downstream 1140451 8320697 ~ 8321042 (-)
G11314 NA non-coding downstream 1287519 8173689 ~ 8173974 (-)
G11650 NA non-coding upstream 79117 9543508 ~ 9543743 (-)
G11658 NA non-coding upstream 125344 9589735 ~ 9594953 (-)
G11662 NA non-coding upstream 231382 9695773 ~ 9696054 (-)
G11675 NA non-coding upstream 504186 9968577 ~ 9968783 (-)
G11677 NA non-coding upstream 526216 9990607 ~ 9991140 (-)
AMCG00016134 NA other downstream 633733 8823545 ~ 8827760 (-)
G11326 NA other downstream 1267061 8191546 ~ 8194432 (-)
AMCG00016119 NA other downstream 1337460 8119221 ~ 8124033 (-)
AMCG00016110 ufm1,LOC107701138 other downstream 1708056 7680911 ~ 7753437 (-)
AMCG00016074 NA other downstream 4531593 4903856 ~ 4929900 (-)
AMCG00016176 NA other upstream 1370021 10834412 ~ 10847811 (-)
AMCG00016194 NA other upstream 2301761 11766152 ~ 11781547 (-)
AMCG00016203 zdhhc20,LOC108438268,LOC106578454,LOC108256609 other upstream 2368037 11832428 ~ 11947322 (-)
AMCG00016211 NA other upstream 2858770 12323161 ~ 12329033 (-)
AMCG00016226 NA other upstream 3385487 12849878 ~ 12870560 (-)

Expression


Co-expression Network