Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00016166 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 9707271 ~ 9711998 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00016166 | True | 222 | mRNA | 0.45 | 2 | 9707271 | 9711998 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016161 | NA | coding | downstream | 22117 | 9684166 ~ 9685154 (-) |
| AMCG00016162 | NA | coding | downstream | 23273 | 9675938 ~ 9683998 (-) |
| AMCG00016147 | NA | coding | downstream | 217653 | 9478790 ~ 9489618 (-) |
| AMCG00016150 | NA | coding | downstream | 231753 | 9468346 ~ 9475518 (-) |
| AMCG00016146 | NA | coding | downstream | 242880 | 9461493 ~ 9464391 (-) |
| AMCG00016164 | NA | coding | upstream | 135 | 9712133 ~ 9713118 (-) |
| AMCG00016165 | NA | coding | upstream | 55217 | 9767215 ~ 9767922 (-) |
| AMCG00016169 | NA | coding | upstream | 121340 | 9833338 ~ 9834282 (-) |
| AMCG00016167 | NA | coding | upstream | 151273 | 9863271 ~ 9872425 (-) |
| AMCG00016172 | NA | coding | upstream | 192045 | 9904043 ~ 9904942 (-) |
| G11662 | NA | non-coding | downstream | 11217 | 9695773 ~ 9696054 (-) |
| G11658 | NA | non-coding | downstream | 112318 | 9589735 ~ 9594953 (-) |
| G11650 | NA | non-coding | downstream | 163528 | 9543508 ~ 9543743 (-) |
| G11633 | hmgb1,LOC105901051,LOC103353583 | non-coding | downstream | 208518 | 9435802 ~ 9498753 (-) |
| G11571 | NA | non-coding | downstream | 392824 | 9314000 ~ 9314447 (-) |
| G11675 | NA | non-coding | upstream | 256579 | 9968577 ~ 9968783 (-) |
| G11677 | NA | non-coding | upstream | 278609 | 9990607 ~ 9991140 (-) |
| G11680 | NA | non-coding | upstream | 302202 | 10014200 ~ 10014451 (-) |
| G11688 | NA | non-coding | upstream | 525497 | 10237495 ~ 10237800 (-) |
| G11699 | NA | non-coding | upstream | 616721 | 10328719 ~ 10329089 (-) |
| AMCG00016134 | NA | other | downstream | 879511 | 8823545 ~ 8827760 (-) |
| G11326 | NA | other | downstream | 1512839 | 8191546 ~ 8194432 (-) |
| AMCG00016119 | NA | other | downstream | 1583238 | 8119221 ~ 8124033 (-) |
| AMCG00016110 | ufm1,LOC107701138 | other | downstream | 1953834 | 7680911 ~ 7753437 (-) |
| AMCG00016074 | NA | other | downstream | 4777371 | 4903856 ~ 4929900 (-) |
| AMCG00016176 | NA | other | upstream | 1122414 | 10834412 ~ 10847811 (-) |
| AMCG00016194 | NA | other | upstream | 2054154 | 11766152 ~ 11781547 (-) |
| AMCG00016203 | zdhhc20,LOC108438268,LOC106578454,LOC108256609 | other | upstream | 2120430 | 11832428 ~ 11947322 (-) |
| AMCG00016211 | NA | other | upstream | 2611163 | 12323161 ~ 12329033 (-) |
| AMCG00016226 | NA | other | upstream | 3137880 | 12849878 ~ 12870560 (-) |
