Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00016219 |
| gene name | LOC106612992,LOC106581126 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 12602884 ~ 12607201 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: Down syndrome cell adhesion molecule-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00016219 | True | 558 | mRNA | 0.51 | 3 | 12602884 | 12607201 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016216 | dscam,LOC105030490 | coding | downstream | 71839 | 12514358 ~ 12531045 (-) |
| AMCG00016217 | dscam,LOC106612992 | coding | downstream | 103883 | 12473263 ~ 12499001 (-) |
| AMCG00016212 | NA | coding | downstream | 226356 | 12360575 ~ 12376528 (-) |
| AMCG00016209 | NA | coding | downstream | 282228 | 12296853 ~ 12320656 (-) |
| AMCG00016210 | LOC106567911,LOC102798362,LOC104951736,LOC105923239,LOC107101883 | coding | downstream | 306824 | 12264274 ~ 12296060 (-) |
| AMCG00016227 | NA | coding | upstream | 120913 | 12728114 ~ 12734030 (-) |
| AMCG00016223 | NA | coding | upstream | 131550 | 12738751 ~ 12743780 (-) |
| AMCG00016224 | NA | coding | upstream | 140728 | 12747929 ~ 12777926 (-) |
| AMCG00016228 | acat1,LOC107653722,LOC107583377,LOC107565255,LOC107758700,LOC107679529,LOC107743429 | coding | upstream | 179057 | 12786258 ~ 12792197 (-) |
| AMCG00016225 | NA | coding | upstream | 186607 | 12793808 ~ 12805884 (-) |
| G12058 | NA | non-coding | downstream | 211476 | 12387798 ~ 12391408 (-) |
| G12046 | NA | non-coding | downstream | 247520 | 12354675 ~ 12355364 (-) |
| G12041 | NA | non-coding | downstream | 249503 | 12353160 ~ 12353381 (-) |
| G11996 | NA | non-coding | downstream | 363870 | 12238785 ~ 12239014 (-) |
| G11865 | NA | non-coding | downstream | 864285 | 11738345 ~ 11738599 (-) |
| G12096 | NA | non-coding | upstream | 31292 | 12638493 ~ 12638698 (-) |
| G12235 | NA | non-coding | upstream | 490790 | 13097991 ~ 13100224 (-) |
| G12359 | NA | non-coding | upstream | 1020054 | 13627255 ~ 13639150 (-) |
| G12358 | NA | non-coding | upstream | 1031102 | 13638303 ~ 13639590 (-) |
| G12373 | NA | non-coding | upstream | 1050242 | 13657443 ~ 13659659 (-) |
| AMCG00016211 | NA | other | downstream | 273851 | 12323161 ~ 12329033 (-) |
| AMCG00016203 | zdhhc20,LOC108438268,LOC106578454,LOC108256609 | other | downstream | 655562 | 11832428 ~ 11947322 (-) |
| AMCG00016194 | NA | other | downstream | 821337 | 11766152 ~ 11781547 (-) |
| AMCG00016176 | NA | other | downstream | 1755073 | 10834412 ~ 10847811 (-) |
| AMCG00016134 | NA | other | downstream | 3775124 | 8823545 ~ 8827760 (-) |
| AMCG00016226 | NA | other | upstream | 242677 | 12849878 ~ 12870560 (-) |
| AMCG00016246 | prdm15,LOC108413920,LOC102786849 | other | upstream | 936147 | 13543348 ~ 13559184 (-) |
| AMCG00016281 | NA | other | upstream | 1813155 | 14420356 ~ 14427290 (-) |
| AMCG00016293 | NA | other | upstream | 2177997 | 14785198 ~ 14791969 (-) |
| AMCG00016327 | NA | other | upstream | 3863410 | 16470611 ~ 16475170 (-) |
