AMCG00016245


Basic Information

Item Value
gene id AMCG00016245
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 13562171 ~ 13582666 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016245
GCGCGCTGCATGCCGGGAGGGACAGGCTGTGCTGGCCGCCCTGCCGCACTCAGCGCATTCAAAGGCAGCTGTCGAGGCGCAGCGCAGCACCAGCGGGTCACAAGAGTCTCCGTTCATGGGCTGCACCGGGGCTCGCTGAGGCCGGTCTCGCCGCCCTGTAACTCCGGCTGAACTTGTTGTCGGTGTGAAGGGAGTATAGCGCTGAACCATGCACAGCGACCCGGGCGACGGCAGCAACTTTGCCGGGTAGCCTGTGGTAGTTACGGCACGGTAGCGGCGCTGGCAGGTTTGCTGGGTCAGCAGGCCTGAGTGCCGCGGATGAGGCTGTGGGATCCGCACTGTTTACGCGGCTCACTGGCACacagtcctcctcctcctcctcctcctcctccgctgCTCGGTAACACATTGCAACTTACACGTCAGTCTCCGCACCCGAGCAGAGTTCACGTCTCCGGCCATTAAACGGGTTTAGAAGTCGAGTTGTTGGCGAGTTTTATTCGTGAAGAAGACCGAAGTGAAGAGTCGGGATGCCGCTTCCTCTCCCGTCTTTCCGTGCCTGAAGGGACCCCGGTGTTTTAACGTTTTAAAAAGGAAGCTTCCATATTATGTTTAAAGATGTCTGTCCTGGAAAGTGTCCTGGCAGACTTCGCCCCGGGGGAGCTGCAGTGGCTGGGCTTGGTCACGCTGTTCGTCGCCTCCGTGGTGACGGTGCTGGTGTATCTGGTTCAGTGGGCGCTGGGACCGGGCGGCCGGGCGGCTGATCGGGCGGAACCGGGCGCCTTCTCGGCCGAGGCGGACGCGCTGCTGAGCTGGGCGCTGGCGCTGAGGAGCTGGAGGTGTGAGTGGCAGAGTGCCTGGTGCAGAGCCCTGAACGACCAGGCGAGACGGACCGGGGGTCCTTTGCACTTTACATTTCAAGAAGATGGACTCCAGCCGTCCAAGCTGGCTGTCAGCCAGGTTTCCAGTTATACAAAATCAGCTGAACATAAGAATGTGTGCTGCCAGGTGTCTGGAGACAGTCTGCAGTTTTCCCTCCGTGTCACCCAGAGGACAGCAGCACCCACAGACCGGCAGAGTTTCACTGTAACAATCTCTCCTCTCCAGATGCAGTGTGAAGCAGTGGCCTGGCCACAGGATGCGCTGTTTGTGACGGTGTGCGTGTTCTTGTTCTTGCCTCTGCAGCTGGAGCTCCAGATGAAGGAAGCGGTGGGGAAGCAGGCACCGGGGCTTCCAAGTGTCGCCGCTGTCCGGAGCCGCGTGCAGGAGATCCTGTGTGCAGCCCGGCCCTCGGTGCTCCTGAGCGGCAGGCCAGCTCAGGGCACAGACCTGAAGGAAATGAGGAACAAGGGGCCTGCGACTCAAGTGACCTCTCCCCCCAAGCCCCCCCGCGCGCATGACTGGAGGCTGCTGGTGAAGAACATTAAAGCCACATGTGAGCCAGGGAGCAGTGCTGCAGGCAGCATTAACCCCTACTGTGTACTACAACTAGATGATCCCCCCCAGAAACTCTCCAGCTTGGTCTTAAAAAATACTTCCAATCCCTCGTGGGACCAGCCTTTTGTCTTCGAGCTCAGTGGAAAATCGAAAGAATTAAAGATCCAACTCTTGGACGAGGGAAAGCCGCAGGAGAGCTCCTTATTGGGTCGTGTTTCAGTGCCTTTTGATCTTTTTAAGAAGCACCCAAATGGACAGCAGGTGTTTGCTCTCAAGACTGAAGACCAAGTTACTGGGTCCCTTTCTGCTGAGTTCACCTACTTGGATCCCAGTGAAGTCCGCTCCTGGCAGCCTCCCACTGTGGTCCCCGCTAAGAAAGTGGAAATGGACAGGACTGTCATGCCCTGTGGGACAGTGGTCACCACAGTTACTGCTGTGAAGAGCAAGCCAGGGAGGTCCCCTCCATCTGCACTCAGTACAGACTCTCCGATGAAGGGTCCCTCCAAAGCAAAGCTGGGTGAGAGAAGAGTTTCTGAACAGCCTGTGTCGGGAACAATGGTCAGCAAAGCCCTGTCCTCCTCTGATACAGAGCTGCTGATGCTGAACGGTACTGATCCAGTGGCAGAGGCTGCCATCCGCCAGCTGCACGAGTCGGCCAAACAGAAGCTGAAATCCCCTGTCAAGAAgagcactattattatttcagggGTGGCAAAGACCCCTCTGTCTCAGGATGATGAGATGGCGCTCATGGCGGGGTATGCAGCAGCGATGGATGCCTCCATGACCCAGGATCTCCAGAGTGAGGTGGCCGCGCCCCCGGTGTCCGCACCGGCTGTGTGCGCAGCAGAGCTGGAGCTGATGGACCTCCAGGAGGGCCCCAGTGGGACTCCGTCTCTTGGGGAGTGGGAGGCCCGGTCGGCGCAAGACCCTGACACGGAGAAAAAGTCTGAGCTGTCCCTGAGCGTGTCCGAGCCCGGCGCCATCAAGAAGGGCAAAGGTGGGTTCTTGCATAAAAGTGCCAAGCTGTTCTTCCGGCGAAGGCACCAGCGCAAGGAGCCGGGAATGAGCCAGTCACACAACGACCTTGTGTACCTGGAGCACCCAGTGGCCGTGGACAAGGAGCGGCGGACTGCCACCCTGAGCCGCATCATTAACAAGAAGCTGCTTCcaaagagcaagagcaagagcaaggcCAACGGCACCACCATGGATCCACACGCGTGATCTTGGGAGAGCTAGGGgcgggtgtgtgtgcgtgcgtgtatgtgtgtgtgtgcgcgtttgACCACTGGATATTCTCCAGGGAACCTGCTGATGGGAGCACACAGTCCTTCAGCAgggcatttttctttctttttaatttcatggagAATGGGCGTGCATGTTAATCTGGGAGGATTTGTGGATCGATGCAGTAGAAATTGCATCACAATCAAAGCAATTGATTTATGGCAAACAACAACTTCCTTCTAAGATGGTGGCCTTTAAAACTGTCTACTTGGCTACTCTTTTTGTCAGCCCAAGAACTTTTTAACCAGAACCTGTGTTTGTACACTATAGCCATGTTGAAACTTTCTTGAAATCTACCCATTTTCACTTAAGGTTGCTGTTGGCGGCTGGGAGGAACAAGTGAAGTAATGAGATTCAGTGCAGATTGGAACTATGGTAACATACTTGAACATTATAGCAACACAAACATCTAATGATGGCATAAATTCCACCATGATCTGTTCTAGCCTTTCTCTGCTTCATACAAGTGTGTTGTTGATTCATTAATGTCAATTGCTGCAAATAATGTTTAACAATGACTACAATGCAAACCATTCAGGCTATTCCCCGTGTCCCTCCTACTTTATAGTGCATGTCATGTATGTCAATGGGAGATTGTTGGGGTAAAAGGGATAAAAGGCAATAGCACTGCACAGCTGGAAGCAAGGACTGCGATTCCTTCAGTTCTGTAGGAACCTGTTATGTGAGAAATAGTAATTGATTGTTAATCAAATTACTAATGgggtcttttttttaatcctattccaaaaatgaaagaaaatatttcttaaGCACTAATACTGTATAGAGCACTTGCCCATCCACCCCACCCTTACCCCCTTAAATTGTgctaaagtgttttttctttgtcacaCCCACAAAGGAAACcatttctgaattaatttcTGATCAGTTTTGATGACAAGCATTAATCACCACCTTTAGCACCcaagaagaatgaaaaacaggGTGGTGACAAATTCTGCTTACGAAAGATGTCTCTGGTTACTGTTGATTTGGATCCCATAAAGCCCTTTCATACAAACTGTGGTGCTAGGCATCTTGAAATGTTGTCATTGCTTTTGTATCTTATATATTCAATGTCACATGCATGGCAATATGCATTATCCTATTTCACTACATATTATCTAAAAACCTAACTATGCCCCCCTCTGCGTGATTGGTTTATATATTACTAAAGGATCCCTCtgcttattattgtaataaaaccTATTCTGCTTTTCTGTTGTGTTAAGGAAGCAATGAAATGCACATGCAAGATTGAGACCCTAATGCATATTCCACTCTGAAGAAAGAATGGTTTGTTTGtcgattttgtttttaactaaaaattatatataggAGAAGATTAATATAATTGAACTTATAATTGTAAAAGACTACATACAATAATGAAAAGCTCTACGATCGCAAGGACTGTGTAAGCTCGTTCCCAGCAGGACTAATAGGGCCCTGTCTGCTGACTTCAGGATTCTATTTGCATTCTTTTGTTCCTGAAAAACAGTGGTGTATCCTAGCAATATCAGTTAATCCACAGTAAACATATTACGTGTATGTACTTTTCTCTTATGGAAGCCAAACACTAATAGTTTACAGTACCTTAAGGGCACTTCTacgcactttttttttttaaacctgcgAAAAAATAGTTTTCTCTTCTGCTTTGCtccaaattagttttttttttttcctcagtgtaTTCTCAAAATCGTGTTCATGGTTCCAATGGATACTCCTCAAAATGCCTCTTGGACTTGGATTTTGAGGTGATCTTTACATTTGTTCATTCAACAGTTAAGCATCTGTTATTATAGGAGTGATCATCAATTATTTGttctcattcctgtttttttcaaattgtatcaACACTATGGTTAAGTTAAGGGACTTGTCTGTTTGGAGACAAATGGGAATGACACTAACCCTGAAAATGGCCTGCTGTAATGTGGTGCTGGTAATTAATGTTATAAGTTTGATTCTGTCAAGGgagtttttgtaatgtaaatagtGTTCTGatcagttttttctttatgGTTTCCATTACATATAACCGCTTTCAACATCTGTTGAAACTAATAGGGAATTGTACAGCTGGGGAAATCATTACAGATGTTTTGAACACTTTTCAGCCCTATCATTTCTTTATTAGCTAAGCATTTTTATTGGCATTCTTATCATATGCATCCAAGATGTAGACTACTGTTTTTATCCTGAATGGGCCTGCTGATGAATTGCTAAatggattaaatatatatatatgtgtaatggATCATAGAGGAGACCGCTGAATGAATCATTATCGGGTGGCTCTTGGCCTAAAATGAGAGCCAGAATGCCACCGTGCACTGGAACTAGTTTAATGCTGACCAGCATTGTTGTACATTCTGTATTGACAGACCGTGTCATTTATGCAAAAACTGTTAATGACTGTCAAGCTACACAATTACAAAGGGAGTGGAATATCTGGCTTTGCATTGTCTTCCTGACATTTGTCATCtcctgccttttttctttttacgaAGACTGGTGGTTTACAGGAGGAAACCTCTGCAGAAGAAATGCTTAGAACCCTTTCCTTGTGAGCTTTAAAGAtactcatttaaatgtattgtacagaatgcattaaagaaagaaaactaccATTTCAAGATCAATACTGTAAAGGTATGAGAGGCTGGCTTTCAGGGTATATTTTTCGATTACCCAACTTAATGGATACAAGTCAACTATGCCATCTGTCCTTATGACTTAAATACGGAGGAGAAATGGTTTAATGTGCCGTGGGTCTCGCACTGGTGTCTGCCACCAGATAAGAGGTTGATTTCTCTTTCGATTTGAGCTTAAATAATTTCAGTATTTACTCAAGCCTCTGCAATGCTGTTCTCGGTAACGCCATTTCACTATGTTTTAATAACTGTATGGAGCTCATTTCCTAGCAGTCAGTTGAAACTCAGTCATATATGGCAATGATAAATAATCCTGAAAGCGGCACTTCTCAATAAAGTGAAGGCTGTTTTAATCCTGAAGACTGTTCAGTTCTGAGCCTAACACACGCCTacctgaaaataatatatataatttgcctATGACCTGTAAATAATGTAACGGCTTACtgatattttctattatttacaATCTGTTCCATTTATTAAAGAGTTCTGATGCCGAATGTTAATATagaacattgaaataaatgcaatgcaggGATTATCACTAATTAACATATCAGGATTATAATTTGGAGCAATAAATATTGACTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016245 True 5992 mRNA 0.47 14 13562171 13582666

Neighbor

gene id symbol gene type direction distance location
AMCG00016247 zgc:112083,LOC108278169,LOC107726099,LOC107662779 coding downstream 19536 13535694 ~ 13542635 (-)
AMCG00016244 NA coding downstream 27196 13522174 ~ 13534975 (-)
AMCG00016248 NA coding downstream 67597 13484337 ~ 13494574 (-)
AMCG00016243 NA coding downstream 85126 13467358 ~ 13477045 (-)
AMCG00016238 NA coding downstream 490529 13065216 ~ 13071642 (-)
AMCG00016251 NA coding upstream 2241 13584907 ~ 13595151 (-)
AMCG00016252 NA coding upstream 72372 13655038 ~ 13675532 (-)
AMCG00016257 wnt11 coding upstream 247094 13829760 ~ 13840039 (-)
AMCG00016258 NA coding upstream 276667 13859333 ~ 13874048 (-)
AMCG00016259 NA coding upstream 292069 13874735 ~ 13879998 (-)
G12235 NA non-coding downstream 461947 13097991 ~ 13100224 (-)
G12096 NA non-coding downstream 923473 12638493 ~ 12638698 (-)
G12058 NA non-coding downstream 1170763 12387798 ~ 12391408 (-)
G12046 NA non-coding downstream 1206807 12354675 ~ 12355364 (-)
G12041 NA non-coding downstream 1208790 12353160 ~ 12353381 (-)
G12359 NA non-coding upstream 44589 13627255 ~ 13639150 (-)
G12358 NA non-coding upstream 55637 13638303 ~ 13639590 (-)
G12373 NA non-coding upstream 74777 13657443 ~ 13659659 (-)
G12585 NA non-coding upstream 844959 14427625 ~ 14428817 (-)
G12594 NA non-coding upstream 848946 14431612 ~ 14436531 (-)
AMCG00016246 prdm15,LOC108413920,LOC102786849 other downstream 2987 13543348 ~ 13559184 (-)
AMCG00016226 NA other downstream 691611 12849878 ~ 12870560 (-)
AMCG00016211 NA other downstream 1233138 12323161 ~ 12329033 (-)
AMCG00016203 zdhhc20,LOC108438268,LOC106578454,LOC108256609 other downstream 1614849 11832428 ~ 11947322 (-)
AMCG00016194 NA other downstream 1780624 11766152 ~ 11781547 (-)
AMCG00016281 NA other upstream 837690 14420356 ~ 14427290 (-)
AMCG00016293 NA other upstream 1202532 14785198 ~ 14791969 (-)
AMCG00016327 NA other upstream 2887945 16470611 ~ 16475170 (-)
G12945 ucp2,ucp2b,LOC106567822 other upstream 3275875 16858541 ~ 16861179 (-)
AMCG00016345 NA other upstream 3283652 16866318 ~ 16870002 (-)

Expression


Co-expression Network