AMCG00016267


Basic Information

Item Value
gene id AMCG00016267
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 13956767 ~ 13970852 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016267
GGGACTTCCTGTTGAAATGCAGGAAGAGAACGAGGGGGTGCTGGAGCAGCGAGAGTGATATTGATCACAACAAAAGAGCAAACAATTGTGAAAATCCCCCGGAACAATGGAGATCAAGCTGTTAATCTCAGCAAACGTGTTCGTATTGTTGTTTGGATCgcatttgcattttttggGTACGTTTCCAGTCACCGCAGTAGAAGTCTATACCCCCTCTGAACTTTTTATTGAGAACGGGACCGTGGGGATCCTCAAGTGCACTTTTACGTCGAAGGAGGTGGTCAGCAGTGATGCAGCAGTGTCCTGGACTTTCCTTCcggtggggggagagagagcggcCACATTCTTCTATTTCTCGAAGGGGAAGTCGTACCCTGGGGACATGCCGCAGTTCAAGGGCAGAGTGATGTGGGCTGGAGACCTCAATAAGAAAGATGCCTCCATAAAAGTGACCAAAATGCAGTTTACCGATAACGGCACCTACGCCTGCGATGTGAAAAACCCCCCTGACATAGTCGTGACACCAGGGAGTATACAGCTACATGTTGTGCTAAAAGATGCTCTTCCTCAGTCGAATGCTGGAGTAATTGCAGGGGCTGTGATTGGAGCCATTCTAGGCCTCACCCTCATCATCTTCGTTTTCTATTTAATATTGAGGACACGGGAACCCAAGCATGAATATGAAGGCTGCACCTCCACCGAGAGTGTGATTTCCCAACCAACGCGGCCGGGGAAGAAAGCCGATTCCAGTACCAAGGGCTCAAGGTGTAGCAGTCCAACTGCCCCTGTCCAGGGCCCTGTGATCTACGCCCAGCTAGATCACTCAGGCAACAGGACCTCGAACGTATTGCCCAAGAATGAGCCTGTGGTTTATGCTGACATCCGGAAGAACTAGAAGCGGGAGTGGAACACGGAAAGGATGAAGTGTGATGATCTAATACAGACAGTTCCTGGATAGCTGCCTATTGTGAATATATGTAAACAGATTCTATTTAATTGGTGCTGAAAGCATTGCATGTTCAAATGTTTCATATGTGCACATATCTTGATTGCAGGGCTCTGTTTCGGTTTTATAGATTTCCTTTTCTTCAAACTAAGcattaaattattacaaattaaatgtcttcTTGGAGGCTGAAACACGGTAACAGTTGATTAGCCTTAAAATCGCAGTAGCTGCGGTACACGGTATTAGATTTCTCGGCAATAGCTTCTGCTGAGGCAAGATTTAGTCGCATCACAAAAGCCACCATGACCAGTTGAGAGCTTTGAACGAGAACAGGTCTGGAATGCTTTGTAGGTACATAATTTTAGGattgtagtttaaaaaagaaaagtttattAATCGCAGTGAATGGAAACCGATTCTGAAAACAATATTGTCTTAATGTGATCCCATGGGCTGTGCTGTACTTCAATCAATGTGTACAATGTAGTGCAAGCAGtttcattatgtaattattcaCTGCCTTCGCTACAGATTTTAAAAGCGAATTGTGAAATACTGCGATTATGACTGAATAAGTATACATAAGACATATTTGCATGTAATTTATGAATAATCACTACAACAATGCCTTatggttttgtttgaaatacTTAACATCCTGGGTGCTTATGTTTTTGGGCACAGGGACGAACTTGCCTTATAAGCTGAATATGGCAGTGTCGAATGGTATCTGTGACAGTGGAAATGCATGTTACTACTCAAAATGGGATGGAAACTGCATAACGCTAATCTCGTATAATTCTGAGCTTATGCTCTCACACAAGGCTTGTATTAATGTGTTCATAGCTTGGCAAACTACCCTGTCACCCAGGCTGTGCCACGGCTtaatttttcacattcttttctaaaaacacaacataattgCAGTGCCCTTCCTGGCTCACATTCATTGTTTCTGCTTTGGATCAAAAGGTGCAATACTGCGTTACCAATACTTTCTTAAAAATGacaattctgttttaattttactgcCCACTATTTAACTCGCATACTATTACAACTAAAGGGACTTTGACATATTTTCAGATTACTTGAAGCTTCTCTCTTACTCTTCTGTTGTAGCCAGATGGAACTGGACTAAGTTGGATGAGCGCATGAGATGCTGGCCTTCTTCTGGTCACTTTTAAAAGGATCGCTAAAAATGTCTTGGGAACCAGGATCGAATGTCGGTGCAAACAAAGAGTTCCCAAATCTTAAAACCACTGTTTTACTGACTACAGAGTTAGTCATTCAGACATCTTTACGATTGCCACCATTTACGGTTACAATActataagcaaaaaaaaaaaaaaaagtgtacagtTATCTCTCTCTTATATggtagaaattacattttatcacAATATGAAAAGGCTTGTTTCTCACAAGGGAATTCTCAGATCATGCACCATCATGCCATCTTTTAAAGTCATACAATCAGTTCTGACGATcagtgttgcttttttttttttttttaacattacagCATCATGCAATAAGATTACGCTTCCTAAAATGTTTGCAGCCCCTTGCTATCACCAGGGGAAATTTATTTGTCAAGCTCAGCAATTTGCACTTGATAAGAACACTTTCAATGGAGCCTTACACACACCGACAAGTCTTAAGATCTGTGAAGTCTCTCCAGTTTAAGGGTCTTTACATTCCATTGTATTGTCTTCCAATCGTTTCTCAAAATGGAGAGTATAAACTATGATCTACGGTGACGAGTTGAACTGCTACCTGTCAAAAAAAGTTAGATAAAACCATACCTCGGATAACACAAATCAAGTTCACTTCGAACATTCCTCAGTGTTCCATTGAGATTGGAACTACCCCTAGTAGGTTTTTAAATCATTGGtgttatagattttattttattttgtagtctCTTTTTGCATTCAAATAAGATGCTGTTTATAGATGTGGAGGAGTACACTATGAGCAAATGTTCTTCCATGCTGGTACACTTGTAATACATATCGGTTTCAAATCATTTGTATTGGTCTTGAACACGTTAGTACCTGTGCTATTCTCTGTATTGCAAGTCTGTATTGAAAACCATTCTGCACAATGTCATGTGTAGGACTATACATTTTCCccttatattaatacaaatattgttttgtcttaAAACTGGAATGTAGTTATAAATTGTGcctttgttttccaaattattCCTACACTTGTGCATCATCTCTGCTTAAAAGTATGaagagatttgttttcctgtgatactgtatgttctttttttaaatatatatatatataaacagttatTGTACCTATTCTAATTTTTTATAAAATCCATTCCCtgtgtattttgtcttttttttgtatttttaagtacagtacagATCCTAATGGATGCAATGTGATGAGAAACCGAGGCTGTAATAGAGAAAAGCTTATTCATTTATTAGAAATCgggagagaaaataatttatGCGGGATGAATCAATATTGGTTCCATCCATTTTGCTGTCTACCCATGCAAAGCATCCCCATGACAtgctgctgccaccaccatgcttcacagtagggatggtgttacctgggtgatgtgctgtcagatttcaaatattccaaatattGAACTTTTGTTTCATCGGaccatatacatatttttgcaaATTTCAATCCGGCTTTTACATGGGTTTTTCAGAAATGGTAAATGAGATCGACTTGACTGCTCAAAGGGATAGTTAATGCTGTAGATATGTGTATACCCCTcctctgatctgtgcctttccacaactttataGTGGTTTTGAAGGCTACTTGGTCTTTAAAATAGTATCTTTGTTTTGAAGgcactacccaactgtgggatCTTACAGAGACTGGTGTATTttatctgaaatcatgtgaatcactttaattgcacacagatggactcctTTCAAATTATTGTGTGAATCCTAAAGGCAATTGGTTGTACCTGAGCTTATATAGGGGTGTCATGACAAAGGGAGTGAATCCCCATTTAAGGAAGActtcatgtttgtatttttcataatgtttttttaacccCCCCTCCATTTTTTCCATattgaaattcagtgtggagtaggttgtgtaaatcaatggGAGAAAACCcagtttaaatgcatacaaatattaggttaaaatgtgaaaaagaccAAGTGAATATTTTCTATAGCCACTGACAATAGATCCTATTATTGCAGTAGAGGGCAGTATAACCCACTAATTCAGGGAGCTGATACTGAGTTATTACAGAATTACATATCACATAGAAGAGCAGAAGAAAAGCATAAAACAACTAAGATTCATTCActcaataatatgaataattatgaaaatgaattaccAAATAACAGTTTCTAATTGAAGATGtgcatacatttcattatttctagTTGTGCCCATTCTAGAAATGTCTTATCCAtagatgctgtttttgttttgattgatagACTCATCAATTATTACTTTTGTAATGGCGAGGGAGGGGTTAGTGGTGTTAATGCAATCGTGATGATCTTGCAGGAAATCAGTTGTGCATATGCATGCCAGGTCACTGGTCGGGGATTTTGCATTACATCAGCACGGGTGCACAGATGGCAGGTGTGAGGTTTCATTATTACCCCAGATCAATGTTCAGGGTCTCAGATGACACGTCGGTTCTTCACTCATCACTTTGTTTGGGGCAAAACTAAATTTCCATTTGCTTTCCTTGGAAATTCATTGAAAAGAAATCCCTGCTTGGTCAGTAATCACGTTGCTTTCACATGAAAATGGCAGGATGCCAACAAAGCTACTacttaagcaaacaaacaggatggaaaaaaaaaaagctgtagaAAATGTTTCCTTACGATTCCAGGAAAATGTGTAGAATTGTAGAATAGTTT

Function

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG:

id description
K06770 MPZ; myelin protein zero

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016267 True 4863 mRNA 0.39 6 13956767 13970852

Neighbor

gene id symbol gene type direction distance location
AMCG00016263 NA coding downstream 19917 13936623 ~ 13936850 (-)
AMCG00016262 NA coding downstream 34811 13912922 ~ 13921956 (-)
AMCG00016259 NA coding downstream 76769 13874735 ~ 13879998 (-)
AMCG00016258 NA coding downstream 82719 13859333 ~ 13874048 (-)
AMCG00016257 wnt11 coding downstream 116728 13829760 ~ 13840039 (-)
AMCG00016266 NA coding upstream 41844 14012696 ~ 14021948 (-)
AMCG00016268 NA coding upstream 116102 14086954 ~ 14132654 (-)
AMCG00016275 dyrk1a,LOC108435291 coding upstream 221495 14192347 ~ 14199159 (-)
AMCG00016274 NA coding upstream 262846 14233698 ~ 14258146 (-)
AMCG00016276 NA coding upstream 296784 14267636 ~ 14267815 (-)
G12373 NA non-coding downstream 297108 13657443 ~ 13659659 (-)
G12358 NA non-coding downstream 317177 13638303 ~ 13639590 (-)
G12359 NA non-coding downstream 317617 13627255 ~ 13639150 (-)
G12235 NA non-coding downstream 856543 13097991 ~ 13100224 (-)
G12096 NA non-coding downstream 1318069 12638493 ~ 12638698 (-)
G12585 NA non-coding upstream 456773 14427625 ~ 14428817 (-)
G12594 NA non-coding upstream 460760 14431612 ~ 14436531 (-)
G12595 NA non-coding upstream 492765 14463617 ~ 14463823 (-)
G12702 NA non-coding upstream 1222350 15193202 ~ 15193641 (-)
G12707 cntn5 non-coding upstream 1446171 15417023 ~ 15417518 (-)
AMCG00016246 prdm15,LOC108413920,LOC102786849 other downstream 397583 13543348 ~ 13559184 (-)
AMCG00016226 NA other downstream 1086207 12849878 ~ 12870560 (-)
AMCG00016211 NA other downstream 1627734 12323161 ~ 12329033 (-)
AMCG00016203 zdhhc20,LOC108438268,LOC106578454,LOC108256609 other downstream 2009445 11832428 ~ 11947322 (-)
AMCG00016194 NA other downstream 2175220 11766152 ~ 11781547 (-)
AMCG00016281 NA other upstream 449504 14420356 ~ 14427290 (-)
AMCG00016293 NA other upstream 814346 14785198 ~ 14791969 (-)
AMCG00016327 NA other upstream 2499759 16470611 ~ 16475170 (-)
G12945 ucp2,ucp2b,LOC106567822 other upstream 2887689 16858541 ~ 16861179 (-)
AMCG00016345 NA other upstream 2895466 16866318 ~ 16870002 (-)

Expression


Co-expression Network