AMCG00016268


Basic Information

Item Value
gene id AMCG00016268
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 14086954 ~ 14132654 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016268
ATGGAGACGGAGCAGCGCTTTTCCGTCCGGACGAAAACAACGTCTCAGCCGGCAGCGCAGACCCGACCCAGCCGGCACAGCAGGTGCGAATCGGACGAGAACCGGCCGCCCATGGGGTTTCATGTTGCTCACAGCATCAATGTCTTCAAGGACGCTCAGTATCATGTTTTTGGGATCTCAGGCACGAAGCAAATCCTGAAAACCTCCAGCCAGATGGAAGTGATACCAATCAAAATGCTGCAGGATCCTCTGATCTGCAGCTCTGTGGGGAAAAATCCCCAAATGATACGCAGAGTGGTGTCCAAGGACGGGCACAGCAACGTCAGGCTTGACAACGTTGAAGGTATGGTCAAGCTGTACCTGCATGACATTTGGACAACTGTTGTAGACATCAAATGGCGCTACAAACTGACCCTGTTCTCTGCCACCTTTGTGATGACCTGGTTCATTTTTGGTATTGTCTTTTATGTCATCGGGAAGCATCACGGTGACATGGACCTACCTGAGATGCCATCTAATCACACTCCCTGCCTGATGAACGTGGAGACACTGACTGGGGCCTTCCTGTTCTCTCTGGAGTCTCAGACCACCATTGGCTATGGCTTCCGATACATCTCTGAGGAGTGCCCCCATGCGGTCTTCACCCTGGTGGCTCAGTTGGTCATCACCTGCCTTGCTGAAATCTTTGTCACTGGCGCTTTCTTGGCCAAGCTGGCCAGGCCTAAGAAGAGAGCAGAAACCATCAAGTTCAGCCACAACGCTGTGATCGACAAGCACGACGGCAAGATGTGCCTCATAATCCGAGTGGCCAACATGAGGAAGAGCCCACTGATCCAGTGCCAGCTGTCAGGCAAGTTCCTGCACACCTACGAGACCAAGGAGGGGGAGAAGACGCTTCTCCACCAGAGCAGCGTGAGATTCCAGGTGGACTCGGCCTCGGACAGTCCCTTCCTCATCCTGCCTCTCACCTACTACCACGTGATTGACAAGGCCAGTCCCCTGAGGCATCTCACGGCGGAAAACCTGCAGAGACAGGAGTTCGAGCTGGTGGTGATCCTCAACGCCACCATGGAGTCGACGGCTGCCACCTGCCAGAGACGCACCTCCTACATCCCCATGGAGATCCTGTGGGGGTACCAGTTCATGCCTGTGCTGTTCACGTCCCCGGAAGGGAAATTACTGGCCGACTTCAGCCAGTTCAACGAAGTGCGCCTCAGCAGCGACGACAACATGCTCTTCTGCAATGACAGAGAGAAGcgggagctggaggagcagtACAGGAAGGAACCATGAAGGGGCTCAAAGAGAGGACGCTCTGAGCAGGGAGGTCTGCCTGTGGGACACCCAGAAGAGCCAGATACCGCTTTCAAGATCTCAAAGAGCCCCGCCCTCctcaaaacaagaacaagacgTGACGAACCCCTTCAACAGCAAAGTACATTCTAATATTTCCATATGTACTGATAAAGGCATGTCTTTGcatatgaacaaaaacacaaaatcaaggaAATATGCAAACATGCCTAGAATTAATCAGCTGATGGCAACAGATGTTTTCTTCACTAACTGCTAAAAATGATAAAGCATAAAATATTTCATGAATTTTCATACTAGGACAattcatatataaacattagCACTTTTGAGAAAGTCGACAGAATTGTGATCTCTTCAGCGTGTATATGAAGaagttagaaagaaaaaaaaaaaaaa

Function

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005242 inward rectifier potassium channel activity molecular_function

KEGG:

id description
K05008 KCNJ15, KIR4.2; potassium inwardly-rectifying channel subfamily J member 15

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016268 True 1713 mRNA 0.51 4 14086954 14132654

Neighbor

gene id symbol gene type direction distance location
AMCG00016266 NA coding downstream 65006 14012696 ~ 14021948 (-)
AMCG00016267 NA coding downstream 116102 13956767 ~ 13970852 (-)
AMCG00016263 NA coding downstream 150104 13936623 ~ 13936850 (-)
AMCG00016262 NA coding downstream 164998 13912922 ~ 13921956 (-)
AMCG00016259 NA coding downstream 206956 13874735 ~ 13879998 (-)
AMCG00016275 dyrk1a,LOC108435291 coding upstream 59693 14192347 ~ 14199159 (-)
AMCG00016274 NA coding upstream 101044 14233698 ~ 14258146 (-)
AMCG00016276 NA coding upstream 134982 14267636 ~ 14267815 (-)
AMCG00016277 NA coding upstream 135512 14268166 ~ 14269315 (-)
AMCG00016280 sim2,LOC108234774 coding upstream 173645 14306299 ~ 14324175 (-)
G12373 NA non-coding downstream 427295 13657443 ~ 13659659 (-)
G12358 NA non-coding downstream 447364 13638303 ~ 13639590 (-)
G12359 NA non-coding downstream 447804 13627255 ~ 13639150 (-)
G12235 NA non-coding downstream 986730 13097991 ~ 13100224 (-)
G12096 NA non-coding downstream 1448256 12638493 ~ 12638698 (-)
G12585 NA non-coding upstream 294971 14427625 ~ 14428817 (-)
G12594 NA non-coding upstream 298958 14431612 ~ 14436531 (-)
G12595 NA non-coding upstream 330963 14463617 ~ 14463823 (-)
G12702 NA non-coding upstream 1060548 15193202 ~ 15193641 (-)
G12707 cntn5 non-coding upstream 1284369 15417023 ~ 15417518 (-)
AMCG00016246 prdm15,LOC108413920,LOC102786849 other downstream 527770 13543348 ~ 13559184 (-)
AMCG00016226 NA other downstream 1216394 12849878 ~ 12870560 (-)
AMCG00016211 NA other downstream 1757921 12323161 ~ 12329033 (-)
AMCG00016203 zdhhc20,LOC108438268,LOC106578454,LOC108256609 other downstream 2139632 11832428 ~ 11947322 (-)
AMCG00016194 NA other downstream 2305407 11766152 ~ 11781547 (-)
AMCG00016281 NA other upstream 287702 14420356 ~ 14427290 (-)
AMCG00016293 NA other upstream 652544 14785198 ~ 14791969 (-)
AMCG00016327 NA other upstream 2337957 16470611 ~ 16475170 (-)
G12945 ucp2,ucp2b,LOC106567822 other upstream 2725887 16858541 ~ 16861179 (-)
AMCG00016345 NA other upstream 2733664 16866318 ~ 16870002 (-)

Expression


Co-expression Network