AMCG00016310


Basic Information

Item Value
gene id AMCG00016310
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 15556869 ~ 15564100 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016310
aataataataataataataataatagaaaagcaatgaaaaacagCACATGGTAGTAACGTGTAATACCAGCATCCGGAAAAAAAATGAACCCAATCCCTGCACATTTTGTGGGAGGAGAAAATGAAACCTTCATTGAACACAGATCTCTGAAggtgtgcgtttgtgtttggGGCAGTTCATGCTGAAACATAAGCTGAAGATGTTGGAAACAGTTTTTAAATCGTATATCTTCTTCAAGAtttaggtttgttttcttttacatgcTTTTAATATTATGGGACGAAAGACACATCACTGGGTAAGTGCAGGGCTAATTTATTGTAATCTATCAACATGCGTAATTGAAACGTCATTACACAATTATCTCACTTGAACTATTGGGACAGTAGAcagtctttttcttctttattgttATCATGGTGATGTTACTAGTTCCAGGGATTGGGAGTGTAACCCACGACATTTTCTAATGGACATAAGAGAAGCATTTGTCAAAACGTAACTTTTTGGCACTATGGGACGGAATACCAGCACTCTGATCACAATACAATTGATACAGATCTCTGCTGTTTGAACACATTTACTCTACATTTGACTGTAACACGCAGACGGATaatcatggaaaacaaaacagacgaGAAAAAGGAAAACGCGCACAGCCCGCACCCAGAGACCTCAACTTCAGACATAGAGAGAATACAAATCTGTGGGTTTATCAAGAGTTTCAATGACTCGATGGACAATTACATGGAAGAGCTGTTTAGTCGCCGTGGAGAAGATGCGACTTACATGCACACTTTGGGCAGCGCGTCTTCCGTGCGTAATCTTGGAAAAATGGATGCGCCTTCCCATGCACCTGGCGCAGGAGACAGCGCGGCTTGGAGAGACTGGACCACCCCCGAAAGCTCAGTACTAACAGAGgacttttataaaaacattgataaatGTACTAACACGGAATACTCTTTCTGGCCTGCGATTACCATGACAGGCAAGGATGTACAAGGCAAGGAAACAAGGTCTCTCCCAGCCGCGGAGTCACATCCAAGAGAAAGTTTGCAGATCTTAAACGAGACATCCACTGCAGCCACTGGGATCCACCACTTTATCAAAGATGAGCAAGAGCAGACGCTCATCGGGGCACCTTCATCATCTGGATTTGGGATGTACCCGCTCAATATATTGCCTTTGAGTCATCCTTACGGGACAGTGAGGGCGCAGAAGGTAGAAGTCGCTGGAGACGCGGAGACCTCGGCGCACTCGCATTGCACCTCTCCAGGCACCGCGCAGGGCCATACGGACGGGGCTCGTTCCTTGGTGGACTCAAAGTTAGATGTCCTTCTGCCTCCCATCTCCATAATAAAGCCAGAGCCCTGCGCCTCGACCTCTCACAGTGGCGACGGGGGCTTGGGTACTGGTTTTGGCGATTACGCGCAAGGGTCGCCTCAGCAGTTACTCATGTGCAAGAATGAACTGTCCACTCTGCCCGTACCGGACCTGTCCTATGATTCACAGTTATGGTGCCAGTCCACAGGTCTACGGGACCACAAACAGCAGCACATGGGATATGCTTCTCCAGGGGGGATGCAGAACACATGCATGATACACGGTTACCCGGGTACATACAGCACATACATTGGTGTAGTGCCCCAGAAATTATGCATGATTTGTGGAGATGAAGCATCTGGATGTCATTATGGCGTCCTCACCTGTGGAAGCTGTaaggtgttttttaaaagagCAGTGGAAGGTCGGAAGTTCAAAAAGTTTGGTAGCTTGAAGGCGGTGGGCGCGGGTCAGTCGCTGGTTCTGCACTCCCTTCGGCCGCTAACAAGCGACTCTCAGGACGCCGCCTCCCTGCCCTACGTGCCCTCAGTGCGAGAGTTTCAGTTCAGTCCACAGATCATCAGCATGCTGGAAGCCATTGAGCCTGAGACCGTGTACGCAGGCTATGATAACTCCCAGCCCGGGCTGCCCAACCTTCTGCTCAGCAGCCTGAACCACCTGTGTGAGAAGCAGCTGCTCAGTATCGTGAAGTGGTCCAAATCACTCCCAGgaTTTCGCAGTTTATTCATTGATGACCAAATGACTTTAATACAGTTCTCCTGGATGAGCTTGATGGTGTTTGCTCTGGGATGGAGGACCTATCAAAATGTTTCTGCCGAAATGCTTTACTTTGCACCAGACCTCATACTCAATGAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016310 True 2206 mRNA 0.47 4 15556869 15564100

Neighbor

gene id symbol gene type direction distance location
AMCG00016304 NA coding downstream 198535 15142256 ~ 15358334 (-)
AMCG00016302 NA coding downstream 414727 15140361 ~ 15142142 (-)
AMCG00016303 NA coding downstream 417010 15137408 ~ 15139859 (-)
AMCG00016294 NA coding downstream 705756 14849850 ~ 14851113 (-)
AMCG00016289 zpld1,LOC105030973,LOC103372413 coding downstream 823411 14709388 ~ 14733458 (-)
AMCG00016308 trpc6a,LOC108429885,LOC108264040,LOC107691992,LOC107713306 coding upstream 13333 15577433 ~ 15596800 (-)
AMCG00016309 NA coding upstream 56956 15621056 ~ 15624452 (-)
AMCG00016316 NA coding upstream 170996 15735096 ~ 15740346 (-)
AMCG00016317 NA coding upstream 178341 15742441 ~ 15758023 (-)
AMCG00016315 NA coding upstream 240760 15804860 ~ 15824266 (-)
G12707 cntn5 non-coding downstream 139351 15417023 ~ 15417518 (-)
G12702 NA non-coding downstream 363228 15193202 ~ 15193641 (-)
G12595 NA non-coding downstream 1093046 14463617 ~ 14463823 (-)
G12594 NA non-coding downstream 1120338 14431612 ~ 14436531 (-)
G12585 NA non-coding downstream 1128052 14427625 ~ 14428817 (-)
G12807 NA non-coding upstream 260811 15824911 ~ 15825237 (-)
G12809 NA non-coding upstream 264666 15828766 ~ 15829026 (-)
G12810 NA non-coding upstream 265255 15829355 ~ 15829567 (-)
G12811 NA non-coding upstream 270722 15834822 ~ 15835082 (-)
G12812 NA non-coding upstream 271094 15835194 ~ 15836468 (-)
AMCG00016293 NA other downstream 764900 14785198 ~ 14791969 (-)
AMCG00016281 NA other downstream 1129579 14420356 ~ 14427290 (-)
AMCG00016246 prdm15,LOC108413920,LOC102786849 other downstream 1997685 13543348 ~ 13559184 (-)
AMCG00016226 NA other downstream 2686309 12849878 ~ 12870560 (-)
AMCG00016211 NA other downstream 3227836 12323161 ~ 12329033 (-)
AMCG00016327 NA other upstream 906511 16470611 ~ 16475170 (-)
G12945 ucp2,ucp2b,LOC106567822 other upstream 1294441 16858541 ~ 16861179 (-)
AMCG00016345 NA other upstream 1302218 16866318 ~ 16870002 (-)
AMCG00016360 aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 other upstream 1699501 17263601 ~ 17266747 (-)
AMCG00016376 NA other upstream 1973934 17538034 ~ 17541342 (-)

Expression


Co-expression Network