AMCG00016317


Basic Information

Item Value
gene id AMCG00016317
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 15742441 ~ 15758023 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016317
ATGCAGACCACGGCAGCAATGGGCCACAGTCTCCACAGGAAAGACAATAACGTGATGGCCCATACAAGTGGGAATGATCCTTTTAGTCTAACCCTCAAGGAGATGAAAGTGGAGCCGGGGGAAGTTCATTCATGTGGGCAGGCGTCGTCAGACAACAGCATGATGGTCTTCGATTTTAAAGATGAACCCGGCAGTCAGATTGATCCAGAGCTCCAGGATCTCTTCGATGAGCTCACCAAGAACGTGCCCTCGCTGAACGACCTGGAGTTTGAAAAGATGCTGAAGCAGGACGACTCCTTCAGCTTGGAGCTCGGACGGCCCGGCTCGGCGGGGATGAGCAAGCCCTCTCCTCAGATGGAAAAGACCATCATCAAGACTGAGTACTCACCAGGTTACAGCCAGACTCCTGCCTGCTCCCCCCAGCTGAGGCCGGCTTCCGCAGGGCCGGTTTTCTCAATGTCTAACAGCTCATTGTCACCTTCTCCAGTGACTTCCGCCCCTCAAAACCCCAGCCAAGGAGCCCAGGGTTCCTCCAGCGCTGCTCGGTCCCTCACCAGTTGGCCGGAAGTGTCCCATGCAGAGCAGTTGAAACAGATGGCCGCCAACCAGCAGCCGACAACAATGCTGcaccaccaccagcagcagcagcagcagcagcagcagcagagccaGTCAACAGGAGTGCCCAGCTGGTCCACGCACTCCTCTCCTGCAGCCTTTGGACAAGAGAAGATCCCAAGTCCTGCCACCCTGTGCCAGCAGAGGATCAGCCCCCAGAATGCCATCCTGCCCCCCATGAGCCAGACCAAAGGGATGAACAACTGTCTCTTCAAGCCGAACGGCAACAGCAGCTCCAACCACATGGACATAAAAGTGCTCAGTGCCAAACAATTGTCTCATTTCAGCCCCAAACCCATTGGCCAACAGATTCCCCCGATGGGAAGCGTACCGAATAAGTCTGCTGTTTTGCACtatcagcagcaacagcagcagcagcagcagcagcagcaagcagcAGCATCGGTTCAGACCCAGTCACAGCCTCCTCCTCACTTCCAGAATCCCAATTTGCCCCGACTTCCCAGTGTCCCAAGCCAGCAGGCCCTTCCTCCTGGGCCTCGACTATCTGTGAGCAGCAGCTTTGTGAGCTCAGCTCCGCcccagcaacagcagcaacccCAGCCACCTCCAACAAGCCAACAGAAAGCTATGGTGAAGAACCAGGTGCTGCAGAGACAGCTGGCTTTACAACCACAGATCATCAATGATTCGGCCAACAAGATGGCACCTACTCCCAATGACAGGATGTATGGCAGTGGTCCAGACCCTCAGCAGGGGGGCTTTAATGTCCAAACGGGCATGAACCAACTTCAGCAACACAGCAACCAAAACCAGATCGGACTGAACCAAAATAACTCCAGGTATCAAGGATCTACCATCCCGGGTAACAATTTTGGGCCTAGTCCTGTGACAAGTACACAGCATATGAGACCACCGGTAAACCAGGAGGTGTCTGGGATGCCAGGACAGAGAATGGCCAGTATGATAACCAATTCTAGCTTAGTTGCACCCAACTGGGCACAAGGCTCCAAACAGACTGCTGTCCCACCTCCTCCAATAGGAGTCAGGAGGTTTCCAAATACACTACAGTCTCATCCGGAAATGGGCAATCGACACTTTCCACAGAAAGCTATGACGCCACCAAACCAGATAGTGCCAGATGTGTCCATGCGCCCTATCAACCCCTTGAACCAAACTCCCAATGGGCAGGCGGTGGTGGCAGCAACAGGACCTGCTCCACGGCAAAGCCAGCCCAGAATGCCAGCTCTGTCCACCATGGCAAACACCAATCAGCTCTCTCCTGTGCAGATGGCAACTGCAGGCAATTTCACAGCATCTGGTCATAACCCCCGTAACTACCAGAGCAACAACCACAGTGGTGACCTGACTTTTGATTTTCTCCAAGACGGAGACAACACCGTTCCAGGCATTAACTCTGATTCAGACTTCATAGACTCACTGCTGAAATCAGGCTCTGGAAATGATGATTGGATAAAAGACATTAATTTAGATGAAATTCTTGGTAGTCACTCTTAA

Function

GO: NA

KEGG:

id description
K06061 MAML; mastermind

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016317 True 2097 mRNA 0.54 3 15742441 15758023

Neighbor

gene id symbol gene type direction distance location
AMCG00016316 NA coding downstream 2095 15735096 ~ 15740346 (-)
AMCG00016309 NA coding downstream 117989 15621056 ~ 15624452 (-)
AMCG00016308 trpc6a,LOC108429885,LOC108264040,LOC107691992,LOC107713306 coding downstream 145641 15577433 ~ 15596800 (-)
AMCG00016310 NA coding downstream 178341 15556869 ~ 15564100 (-)
AMCG00016304 NA coding downstream 384107 15142256 ~ 15358334 (-)
AMCG00016315 NA coding upstream 46837 15804860 ~ 15824266 (-)
AMCG00016319 NA coding upstream 83236 15841259 ~ 15849112 (-)
AMCG00016321 NA coding upstream 132237 15890260 ~ 15902820 (-)
AMCG00016320 tenm4 coding upstream 163074 15921097 ~ 16030468 (-)
AMCG00016318 tenm4,LOC107740368 coding upstream 299086 16057109 ~ 16061718 (-)
G12743 NA non-coding downstream 136954 15547050 ~ 15605487 (-)
G12707 cntn5 non-coding downstream 324923 15417023 ~ 15417518 (-)
G12702 NA non-coding downstream 548800 15193202 ~ 15193641 (-)
G12595 NA non-coding downstream 1278618 14463617 ~ 14463823 (-)
G12594 NA non-coding downstream 1305910 14431612 ~ 14436531 (-)
G12807 NA non-coding upstream 66888 15824911 ~ 15825237 (-)
G12809 NA non-coding upstream 70743 15828766 ~ 15829026 (-)
G12810 NA non-coding upstream 71332 15829355 ~ 15829567 (-)
G12811 NA non-coding upstream 76799 15834822 ~ 15835082 (-)
G12812 NA non-coding upstream 77171 15835194 ~ 15836468 (-)
AMCG00016293 NA other downstream 950472 14785198 ~ 14791969 (-)
AMCG00016281 NA other downstream 1315151 14420356 ~ 14427290 (-)
AMCG00016246 prdm15,LOC108413920,LOC102786849 other downstream 2183257 13543348 ~ 13559184 (-)
AMCG00016226 NA other downstream 2871881 12849878 ~ 12870560 (-)
AMCG00016211 NA other downstream 3413408 12323161 ~ 12329033 (-)
AMCG00016327 NA other upstream 712588 16470611 ~ 16475170 (-)
G12945 ucp2,ucp2b,LOC106567822 other upstream 1100518 16858541 ~ 16861179 (-)
AMCG00016345 NA other upstream 1108295 16866318 ~ 16870002 (-)
AMCG00016360 aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 other upstream 1505578 17263601 ~ 17266747 (-)
AMCG00016376 NA other upstream 1780011 17538034 ~ 17541342 (-)

Expression


Co-expression Network