AMCG00016319


Basic Information

Item Value
gene id AMCG00016319
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 15841259 ~ 15849112 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016319
GATGCTGGACGATCCATGGTGTCGAGCAGCCACACCCCTCGCTCCATGCCTGCAGACCTGACTGGCTCCATCGCTCCTCTGATTGGGGAGCGCAAGTCTTCTGCCCCCACGCACTCCAGTCAACCAATGCTCTTTACCTTTGACATGCCAGTGCGCCACAGCCACAACTCGCTGTCCACCAGTGCCCCCCAGGACTACCTGTTCCTTCACCAGTGTATGAGTAGGAAGACGGACAGCACCAGGAGTGCCAGTTTCTCCCAGTGTACGAGGAGCACCCTGTTGGTGGGCAGCGACTCAGCGGTGCAGAAACTCTCGCACGGCTTCAGCCACTGCCTCAGCGGGATGGGTGCCCAGCTGCATGGCTTCTACAGCCTGCCCAAGCCCGGCAAGCACCAGTCTTCCCTGGGGGACTCTCCTCGGGAAAGCTCTTACGACCTGCCCCGGGGTTATGGCTCGGAGGGCCACGTGCACGGCAGTCTGAccgagctggagctggagaCTGAGGAGGTGTACTCTTTCAAGACCCCGAACAATGCCCCCGCCGGGCAGCTAAACGACCGCCCCCCCGACAACCACGACCCCCCCACGTCACCGGGCTCCTTCTACCAGACCCCCCGTACTTTTGACAAGAACCACAATGCCGTGGCGCCCGCAGGCTCAGAGTCCCCTGCCATACCGCCACCCCGGCCCCCCAAACCCAGTCATGGCTCGGAGCTCAAGTGGGGCAGTCCCAATTCACTGGGGGCGCACAATGGAGAGGCAGCCACAGTGTCCGCCACCCCCCGGAGGAACACCCTGCCAGCTGTGGAGAATATCAGGCTACACAGAGGCTCGTCCTTCGAGACAAACGACCACCACAGGCAAATCTGCCTCAGCAACAATGGCCAGTCTGTGGAATCTGTCAACGACGGCTTCAGTTCTTACCTCAGAACTAAACCGCCGGTGGCTCGGTCGGACAGCGGTGACTCGGAAGACAATTACGTGCCGATGAACCCgggctcctcctcctcacccttCAATCCCTCCCTGGCAAACAGCTCCCAGAACGTCTACATTCCCATGAGCCCCGGGCCGCACCACTTTGATTTCCCAGGGTTCTCTGCCACCCTCCCCACCCGGAAAGGCAGCACCGCCTCCCTGTGCCACCGGCCAGGGCGGCTCAGTGACGTCACACCCCCTCCTGTCAACCGCAACCTGAAACCTGACAGGATGTcaAAGCCAACACCACTGGACTTGAGGAACAATGCTATTATTGACGAGCTCCCATTCAAATCCCCAGTCACCATGTCCTGGTCCAGACCTGTGCCGGTGATGAACTCCATCTCCTCACAGCACTGTCGACCCATTTCCACGCAGAGCATCACCAGCACGGATTCGGCCGACAGTGAAGAAAACTATGTTGCAATGCAAAACCCAGTGTCTACCTCGCCTGCAGTGAGCGGCACAAGCAGTCCAGCACCCAGAAAATGTGGGAATGTCGACTACCTGGCCCTGGACTTTCAGCCAAGTTCCCCAAGCCCACACAGAAAGCCCTCCACGTCCTCTGCCAACTCAGACGAGAAAGTGGACTATGTGCAGGTGGATAAGGAGAAGACGCAAGCACTGCAGAACACCATGCAGGAATGGACAGATGTCCGCCAGTCCACAGAACCAGCCAAGGGGGTCAAGTCATGACAGTAAACCTCAGAGAAACTGATAGATAGTGTATGGCTTCAGCTGTCGCAGGAAAACCACACCATGTCCTCACCTCACCCTCGTGTTGCCAATTCTAATTGTACAGGAtgcatatggaaaaaaaaaagacaaaaagctGTTCGATCCTTTACTTTATTAAAGCAGATCTAGCAGAAGCTTTACCAAACGCTTTTTCTCATTGGTGACTAAAGCAACATCTCCCATCTTCCTCAAATAAAACAGCCGATTACAGTCTAGGTGAATGAAAGGTATGCCTTtgaaacaacactttttgcctTTTGAAAACTAGTCTATATACtgtatgcattgttttgttatgaATATTTAACACAGCAGAcgaaaacaaactgcaatgcaaatGTCAGCTGTCAGTTTCCAAGGTTACAGTTTGCATTAcaattggaaatatatatatatacagagtggAATGAACGCCATATTATTGCTTTTGTTATGAtgtcagcttttaaaataaatcggagaaataaaaggcattgattttaattacaagACACACTCAGGCCAGGGGCAGCATGCTATCAAATCTGATTGAAAACAGTTAAAGCTGACCTACcacacaggaaaagaaaaagaggcttcATCACTCCATGCTGAACGAGAATCACACAATGCAGGTCAATTCTATATAGCTTTAACAAGTATCccacaaaacacttttttcctttcGAATGTCAAGCTGAATTCttaattcatgcatttgtttttgtgataaGTATGTAATTCATGtctaaaaaggggaaaaaaatccttatTCATGTGATTAAGTCATTTCAAGTGATTTGAAGCCACAGACAGTCAGGAAAGATTGATTATCCTTTTTGGAGTGGCATTTACCCACTAAGGGCACTATTGCTTATTGCTTGTAAACACCTGCACCATAAGGttgcagtaaaaaaaatgaTCCCTAGAAACAAATTACCCAAAGGAGGAAAAAGGCAATTAATTCAGCAATTAAACACTATCTACTGAGACATCTCATTTAGAAATAAGATCAATGAAAAATATCATAGTTTTGTGTAAAGATAATTTTCCATTGATTTACAGTGGTATTCTGAACAGACTATAATGCAAATAGATTTGTGATGAGTGATGGTTATGATTTTCGTCACAACAGCACAGATGGCTGGAGGATTATCTGactgatcaaattaattggAGCAGCAGTGACTGAGACATTTACAGTGCTCTTCAAATGGAAAGTTCCCTGCATTAACACCACTATAACAGTATCAGACAACTGATAACAGATGCAAGCAATAGTGCTTTGAATTGGGGGGGGTGTGCTTGGGCCTGGTGTTATTTGgcgcacacttttttttatgtcatatgtatgtatgtatgtatgta

Function

GO: NA

KEGG:

id description
K08091 GAB2; GRB2-associated-binding protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016319 True 3063 mRNA 0.49 8 15841259 15849112

Neighbor

gene id symbol gene type direction distance location
AMCG00016315 NA coding downstream 16993 15804860 ~ 15824266 (-)
AMCG00016317 NA coding downstream 83236 15742441 ~ 15758023 (-)
AMCG00016316 NA coding downstream 100913 15735096 ~ 15740346 (-)
AMCG00016309 NA coding downstream 216807 15621056 ~ 15624452 (-)
AMCG00016308 trpc6a,LOC108429885,LOC108264040,LOC107691992,LOC107713306 coding downstream 244459 15577433 ~ 15596800 (-)
AMCG00016321 NA coding upstream 41148 15890260 ~ 15902820 (-)
AMCG00016320 tenm4 coding upstream 71985 15921097 ~ 16030468 (-)
AMCG00016318 tenm4,LOC107740368 coding upstream 207997 16057109 ~ 16061718 (-)
AMCG00016328 NA coding upstream 559243 16408355 ~ 16409278 (-)
AMCG00016326 NA coding upstream 570762 16419874 ~ 16425645 (-)
G12814 NA non-coding downstream 467 15837835 ~ 15840792 (-)
G12812 NA non-coding downstream 4791 15835194 ~ 15836468 (-)
G12811 NA non-coding downstream 6177 15834822 ~ 15835082 (-)
G12810 NA non-coding downstream 11692 15829355 ~ 15829567 (-)
G12809 NA non-coding downstream 12233 15828766 ~ 15829026 (-)
G12838 NA non-coding upstream 374373 16223485 ~ 16223728 (-)
G12867 NA non-coding upstream 618505 16467617 ~ 16467819 (-)
G12868 NA non-coding upstream 618861 16467973 ~ 16468272 (-)
G12894 NA non-coding upstream 746566 16595678 ~ 16596220 (-)
G12897 NA non-coding upstream 759606 16608718 ~ 16608944 (-)
AMCG00016293 NA other downstream 1049290 14785198 ~ 14791969 (-)
AMCG00016281 NA other downstream 1413969 14420356 ~ 14427290 (-)
AMCG00016246 prdm15,LOC108413920,LOC102786849 other downstream 2282075 13543348 ~ 13559184 (-)
AMCG00016226 NA other downstream 2970699 12849878 ~ 12870560 (-)
AMCG00016211 NA other downstream 3512226 12323161 ~ 12329033 (-)
AMCG00016327 NA other upstream 621499 16470611 ~ 16475170 (-)
G12945 ucp2,ucp2b,LOC106567822 other upstream 1009429 16858541 ~ 16861179 (-)
AMCG00016345 NA other upstream 1017206 16866318 ~ 16870002 (-)
AMCG00016360 aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 other upstream 1414489 17263601 ~ 17266747 (-)
AMCG00016376 NA other upstream 1688922 17538034 ~ 17541342 (-)

Expression


Co-expression Network