AMCG00016326


Basic Information

Item Value
gene id AMCG00016326
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 16419874 ~ 16425645 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016326
ATTGATCACTTTGGCTTTGCTGAAGATGCAACATTCAAGCAGAGATACCTGGTGGCTGACCAGCATTGGCACAAAGATGGAGGGCCAATCCTGTTTTACACTGGCAATGAAGGCGACATCACCTGGTTCTGCAATAACACAGGTTTCATGTGGGATGTGGCGGAGGAGCTTGGTGCAATGTTAGTTTTTGCAGAACACAGGTATTACGGAGAGTCCCTGCCATTTGGGGATAAGTCCTACAGTGATGCAAAACATCTGAATTTCCTGAGCTCAGAGCAGGCTCTTGCAGACTTCGCCGTGCTGATCGAGGGGTTGAAGCGCACAGTTCCAGGGGCCCAACACAGCCCTGTCATCGCCATTGGAGGATCCTATGGGGGAATGCTGGCCGCCTGGTTAAGAATGAAGTATCCACACGTCGTTGTGGGTGCCCTGGCTTCCTCTGCTCCGATATGGCAGTTCACAGACCTGGTACCCTGTGGTGATTTCTACAAGATTGTGACTCAGGATTTCTCCATGAGTGGGATGGGCTGCTCTGAGAGCATTAGCAAGTCATGGAAGGCGATTGACAACATCTCCTCAACAGACGATGGACTGCAGTGGCTCTCCAGTGCGTTTAAGCTCTGCTCTCCACTCAGAAAGAAGGAGGACGCTGTTGCTTTCAAAGCATGGCTTCAAGAGACCTGGGTCAATTTGGCAATGGTCGACTACCCTTATGAAGCCAACTTCCTGCAGCCCCTGCCAGCTTGGCCAATTAAGGTGGTATGTCAGTTTCTGAAAAATCCATATCGGCCAGAGAAAGATTTGCTGAACGGTATTTTCCTGGCAGTGAATGTTTACTACAACCACACAGGAAACGCACCATGCCTCAATATTTCACAAACTGCAACTGGAAACCTGGGCTATATTGGCTGGTACTATCAGGCCTGTACAGAAATGGTGATGCCCATGTGCACAGATGGCAGCAGTGACATGTTTGAGCTGCAGTCGTGGGATTTCAAGGCGTTCTCTGACGAATGTTACAGCCTGTTTGGCGTGCGGCCCCGTGCAGACTGGGCCACTACTGTTTATGGAGGGAAGAACATCAGCTCTCACAGCAACATCGTCTTCAGCAATGGAGGCCTGGATCCCTGGTCAGGTGGTGGGGTGACTCGGAACATCTCAAAGTCAGTTGTTGCCATCATGATCCCGGAAGGGGCTCATCACTTGGATCTGCGCTACAACAATGCCTACGACCCAAAATCTGTGCTCCAAGCCCGGGCCTTGGAGGTGAAGTACATGACCGAGTGGATTAAAGAGGCTTCAGAAAATCCCAAATGTCCACATAATCAA

Function

GO: NA

KEGG:

id description
K01285 PRCP; lysosomal Pro-X carboxypeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016326 True 1329 mRNA 0.50 8 16419874 16425645

Neighbor

gene id symbol gene type direction distance location
AMCG00016328 NA coding downstream 10596 16408355 ~ 16409278 (-)
AMCG00016318 tenm4,LOC107740368 coding downstream 358156 16057109 ~ 16061718 (-)
AMCG00016320 tenm4 coding downstream 389406 15921097 ~ 16030468 (-)
AMCG00016321 NA coding downstream 517054 15890260 ~ 15902820 (-)
AMCG00016319 NA coding downstream 570762 15841259 ~ 15849112 (-)
AMCG00016325 rab30,LOC107670675 coding upstream 9847 16435492 ~ 16445488 (-)
AMCG00016332 NA coding upstream 60816 16486461 ~ 16486880 (-)
AMCG00016331 NA coding upstream 78571 16504216 ~ 16508407 (-)
AMCG00016333 NA coding upstream 150964 16576609 ~ 16586666 (-)
AMCG00016335 NA coding upstream 161846 16587491 ~ 16752990 (-)
G12838 NA non-coding downstream 196146 16223485 ~ 16223728 (-)
G12814 NA non-coding downstream 579082 15837835 ~ 15840792 (-)
G12812 NA non-coding downstream 583406 15835194 ~ 15836468 (-)
G12811 NA non-coding downstream 584792 15834822 ~ 15835082 (-)
G12810 NA non-coding downstream 590307 15829355 ~ 15829567 (-)
G12867 NA non-coding upstream 41972 16467617 ~ 16467819 (-)
G12868 NA non-coding upstream 42328 16467973 ~ 16468272 (-)
G12894 NA non-coding upstream 170033 16595678 ~ 16596220 (-)
G12897 NA non-coding upstream 183073 16608718 ~ 16608944 (-)
G12902 NA non-coding upstream 198038 16623683 ~ 16623906 (-)
AMCG00016293 NA other downstream 1627905 14785198 ~ 14791969 (-)
AMCG00016281 NA other downstream 1992584 14420356 ~ 14427290 (-)
AMCG00016246 prdm15,LOC108413920,LOC102786849 other downstream 2860690 13543348 ~ 13559184 (-)
AMCG00016226 NA other downstream 3549314 12849878 ~ 12870560 (-)
AMCG00016211 NA other downstream 4090841 12323161 ~ 12329033 (-)
AMCG00016327 NA other upstream 44966 16470611 ~ 16475170 (-)
G12945 ucp2,ucp2b,LOC106567822 other upstream 432896 16858541 ~ 16861179 (-)
AMCG00016345 NA other upstream 440673 16866318 ~ 16870002 (-)
AMCG00016360 aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 other upstream 837956 17263601 ~ 17266747 (-)
AMCG00016376 NA other upstream 1112389 17538034 ~ 17541342 (-)

Expression


Co-expression Network