AMCG00016385 (gria4)


Basic Information

Item Value
gene id AMCG00016385
gene name gria4
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 17715768 ~ 17716983 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016385
GAAGGTCCTTATGTCATGCTGAAGAAGAATTGGGAGATGTTTGAGGGGAATGACCAGTACGAGGGCTACTGTGTGGATCTGGCGTCAGAGATTGCGAAACACATTGGCATCAAGTACAAGATATCCATTGTGCCTGATGGGAAGTATGGAGCCAGAGACGCAGAAACCAAAATCTGGAACGGGATGGTGGGAGAACTGGTATACGGGAAAGCAGAGATCGCAGTGGCCCCGCTGACCATTACCTTGGTACGAGAAGAG

Function

symbol description
gria4 Enables AMPA glutamate receptor activity. Predicted to be involved in positive regulation of glutamatergic synaptic transmission. Located in extracellular vesicle. Implicated in schizophrenia.

NR:

description
PREDICTED: glutamate receptor 4 isoform X7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016385 True 258 mRNA 0.50 2 17715768 17716983

Neighbor

gene id symbol gene type direction distance location
AMCG00016384 LOC107548160,LOC108279362,LOC108440167,LOC103155416 coding downstream 11383 17696929 ~ 17704385 (-)
AMCG00016381 NA coding downstream 29031 17678130 ~ 17686737 (-)
AMCG00016374 NA coding downstream 209325 17503880 ~ 17506443 (-)
AMCG00016375 cul5,LOC107714978,LOC107554266 coding downstream 225349 17475418 ~ 17490419 (-)
AMCG00016369 dcun1d5,LOC106612886,LOC107600360,LOC107712802 coding downstream 242837 17466683 ~ 17472931 (-)
AMCG00016383 gria4,gria4a,gria4b,LOC107756206 coding upstream 23649 17740632 ~ 17748750 (-)
AMCG00016382 LOC107706429,LOC107681140,LOC107548160,LOC107718985 coding upstream 68875 17785858 ~ 17787095 (-)
AMCG00016390 dync2h1,LOC106613216,LOC106593015 coding upstream 218153 17935136 ~ 17948136 (-)
AMCG00016389 dync2h1,LOC106613216,LOC108413322,LOC107566891,LOC103461033 coding upstream 268448 17985431 ~ 18004633 (-)
AMCG00016391 dync2h1,LOC106613214 coding upstream 303056 18020039 ~ 18069565 (-)
G13129 NA non-coding downstream 219421 17495923 ~ 17496347 (-)
G13126 NA non-coding downstream 221422 17493855 ~ 17494346 (-)
G13091 NA non-coding downstream 338229 17375266 ~ 17377539 (-)
G13065 clns1a,LOC102781126 non-coding downstream 428939 17284403 ~ 17286829 (-)
G13045 rps3 non-coding downstream 469438 17241944 ~ 17246330 (-)
G13254 NA non-coding upstream 445804 18162787 ~ 18165770 (-)
G13334 NA non-coding upstream 1109211 18826194 ~ 18901976 (-)
G13339 NA non-coding upstream 1341422 19058405 ~ 19058673 (-)
G13341 NA non-coding upstream 1360385 19077368 ~ 19077823 (-)
G13366 NA non-coding upstream 1371241 19088224 ~ 19088632 (-)
AMCG00016376 NA other downstream 174426 17538034 ~ 17541342 (-)
AMCG00016360 aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 other downstream 449021 17263601 ~ 17266747 (-)
AMCG00016345 NA other downstream 845766 16866318 ~ 16870002 (-)
G12945 ucp2,ucp2b,LOC106567822 other downstream 854589 16858541 ~ 16861179 (-)
AMCG00016327 NA other downstream 1240598 16470611 ~ 16475170 (-)
G13367 NA other upstream 1374256 19091239 ~ 19105381 (-)
AMCG00016453 NA other upstream 2411925 20128908 ~ 20135547 (-)
AMCG00016479 NA other upstream 2899526 20616509 ~ 20636960 (-)
AMCG00016480 NA other upstream 2949159 20666142 ~ 20683024 (-)
G13962 NA other upstream 5738109 23455092 ~ 23455811 (-)

Expression


Co-expression Network