AMCG00016414


Basic Information

Item Value
gene id AMCG00016414
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 19184938 ~ 19205594 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016414
CTTTTCCACAAACCAACGTGTGGCGCTAGGATTACTGAGGATATTAACTGccgaaacattttgtttgtgttttttttattacatggATTTATGACAAACTTTCCTGGTtaacattttgttatatatttttgtgacaGTATGACAGGGGCATGTTTTAGAACTCAATTAGCTGGACAGGAGAATGACAGTTTGTAGTTCATACTAGTAGGTGGTATGTAAgtcataaatcattcaaaaatataGTTTCACAGAACGTGTGGAAAcacaaatgtgatttttgttgAACTTATTGTTCTTTGTTTATGGAGTTATAATCAGTAATTCAGTCTGGGTGTGGatgtataatacaaaaaaatataaaattagacCTAATATAATAATCTGTATTTTCAGGTAAAAGATGCCTGTCAACATCCCTGGACTGATATCTgtacttgtgttttatttggtcATTCTCGCCGTGGGAATTTGGGCTTCTAGAAAGTCCCAAATAGAAGAGAAGAAATGCCCAGGAAACAGGAGCGAAATCTCCATGGTCGGAGGGCGAAATATGAATATTGTCACTGGGATTTTTACAATGACAGCAACATGGGTTGGAGGAGGATACGTTATAGGGACGGCAGAAGCAGTTTACGTCCCCACACTTGGCCTGATCTGGGCTCTGGGGCCTTTAGCCTATGTAATTAACTTCATTGTTGGTGGTACCTTTTTTGCCAAGCCCATGAGAGAGAAGAATTTTGTGACAATGATGGatccatttcaaataaaatatggaaaCGCAGTatcaagtttgtttttaatacctGCATTTATAGGTGATTTACTATGGGTAGCATGTATTTTGGGTGGTTTAGGAGGAACAATGAGTGTTATTCTGGACATGTCTTCTATGCACTCAGTCTTCATTTCCACCGGAGTAGCCATTTTGTATACACTGCTGGGAGGCCTGTACTCAGTGGCGTATACCGATGTAATCCAGCTGATTTTTATGGCTATCAGTCTGGCAGTTTGTGTTCCATTCGTACTGATGAATCCAGCATCCTCAGGCATTACATTCACGGCTACTCATGAACTGTTTCAAGCTCCCTGGCTTGGGAAACTGGAACTGAGAGACTTGGGCAAATGGATAGATGACCTTTTGCTTCTGTCTATAGGAGGATTGTGCTATCAGGCCTTCTTTCAGCGAATTCTGGCCGCTGCCTCACCCTCTCACTCCCAAATCATGTGCTACGCTGCCGCAGTCTTCTCCGCCAGCATGGGCATCCCTTCAGTGCTTATTGGAGCCGTAGCCGCATCAACAGACTGGAACCAGACCAGCTATGGTTTGCCGACTCCATTTGAAAAGGGTGAGGGCGGTAAAATCCTTCCCATCGCTCTGCAGCATCTCTGTCCCCCCTTTGTCTCCATCATTGGCATCGGAGCCATCGCGGCTGCCGTGATGTCATCAGTCGACTCTGCCATGCTGTCCTCTGCCTCCCTTTTTGGACGAAACATCTACAAGAGCATCCTTCGCAAACAGAGTGCCAGTGTGTGAAGATGGCCGTTGATATCCCTGGTCTGGTAGCCGTGATCGTCTTCTACGTCCTCATCCTCATCACTGGCCTCTGGGCCGCAAGAAAGTCCAAGAAAGAGGAGAAGAGATGCACAGGGAATAAGAGTGAGATCACAATGGTTGGAGGCCGCAACTTGAATGTGTGGGTTAGCAGTTTCACCACCACAGCAACATGGGTTGGCGGAGGCTTCATCTTGGGGACGGCAGAAGTTGTCTATCTACCATCACAGGGCCTAGTCTGGCTTGTTGCCCTGATAGGATTTTCTCTGAGCTTGATAGTTGGTGGACTTTTCTTTTGCAAACCAATGAGAGGAAACAATTATGTCACAATGATGGATCCTTTCCAAATTAAGTACGGGAACACACTGACCAGCATACTGTTCATTCCTGCACTGCTGGCTGATGTCTTCTGGGTAGCCTGTGTCCTGGCTGCTTTAGGAGGAACCATGAGTGTAATACTGGATATATCCTCTTTCTACTCCGTCATCATCTCGGCTGGCGTAGCTATATTATATACTCTGCTGGGAGGGCTGTACTCTGTAGCCTACACCGATGTAATCCAACTGGCCTTGATGTTCTTTGGTCTGTGGCTTTGTATCCCCTTCACTCTTATGAGCCCAGCATCTGCAGATATTACTTACACAGCTGTGAACACACTGTACCAAACGCCATGGTTGGGCAACATTGAACTGAGGGACGTGGGGAGATGGCTAGATGACCTTCTACTAgtgACCCTAGGTGGAATTTGTTACCAAGCTTTTTATCAAAGAATCCTGGCAGCAGCTACCATCACTCAGGCTCAGGTCACATGTTATATTTCATCGATTATCTGCTTTACTTTGGGCATACCTCCAGCGATCATTGGGGCTGTGGCAGCGTCAACAGACTGGAACCAGACAAGTTACGGTTTGCCCACGCCGTTTGAGAAAGGAGAAGCTGGTATGATTTTGCCCATCGCTCTGCAGCAGCTCTGTCCTTCTTACATCTCCATCGCAGGGATCGGAGCCATCGCCGCCGCCGTCATGTCATCAATAGACTCGGCACTGCTGTCCTCCGCCTCCATGTTTGCACGAAACATCTACAAGAAGATCCTCAGGAAGAAAGCGTCCGAGTCCGAAGTGCTCATGGTGGTGAAGCTTTCCGTCCTGCTCTGTGGGTCGACTGGAATGGGCCTGGCAATGACAACGTCCTCAGTGTACATGTTCTTCATGCTCAGCGGGGACATGATGTACACTGTGATGTGCTCCCAGCTCCTCTGCATTCTCTTCATACCCAAGTCGAACGCCTATGGTGCCAGCGTGGGGTTTGTGGTGGGGCTGCTTCTGAGATGTTTAGCAGGAGAACCGGTACTGAGAATCCCTCCTGTGATCCACTTCCCAGGCTGCAGGCTGGTGAACGGCGTCTACGTACAGTTTTTCCCCTTCCGAACCGTGTCCATGCTGATTTCTCTGTTGTCCATTGTGGTCATCTCCTACCTGACTTCCTTCCTGTTCGACAGAGGCCTGCTACGAGAAGAGTGGGATGTTTTCAACGTCAAGGAGAATAACAGCGTGACCCTCAAAGATGTGGCTCTGAAGGAACTCACAGAGGAAAGCACCCTGAACTCCCCTGTCACCAGTAAAGAGGACGTTCACATTCTGGAGTGAAGgatacactgaaacaattgttCTGTCACATCTGTTTTTATGGTTCTTTATAAAGATGctgtactaaataaataatgtttctggCTAAATAGGAAGGAAAGTCAGTTACAGTCCTATTCCCC

Function

GO:

id name namespace
GO:0006810 transport biological_process
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016414 True 3320 mRNA 0.46 15 19184938 19205594

Neighbor

gene id symbol gene type direction distance location
AMCG00016410 NA coding downstream 23210 19155334 ~ 19161728 (-)
AMCG00016409 NA coding downstream 41420 19109142 ~ 19143518 (-)
AMCG00016404 NA coding downstream 145434 19025838 ~ 19039504 (-)
AMCG00016403 NA coding downstream 170189 19006083 ~ 19014749 (-)
AMCG00016402 NA coding downstream 283357 18897556 ~ 18901581 (-)
AMCG00016419 NA coding upstream 71704 19277298 ~ 19279668 (-)
AMCG00016420 mre11a coding upstream 76108 19281702 ~ 19316677 (-)
AMCG00016418 cwc15,LOC100196400 coding upstream 160490 19366084 ~ 19375596 (-)
AMCG00016424 sesn3 coding upstream 172406 19378000 ~ 19406939 (-)
AMCG00016423 fa76b,fam76b,LOC106603374 coding upstream 221861 19427455 ~ 19437740 (-)
G13366 NA non-coding downstream 96306 19088224 ~ 19088632 (-)
G13341 NA non-coding downstream 107115 19077368 ~ 19077823 (-)
G13339 NA non-coding downstream 126265 19058405 ~ 19058673 (-)
G13334 NA non-coding downstream 282962 18826194 ~ 18901976 (-)
G13254 NA non-coding downstream 1019168 18162787 ~ 18165770 (-)
G13413 NA non-coding upstream 51044 19256638 ~ 19256919 (-)
G13414 NA non-coding upstream 52729 19258323 ~ 19258557 (-)
G13615 NA non-coding upstream 797555 20003149 ~ 20004940 (-)
G13680 NA non-coding upstream 1110148 20315742 ~ 20316579 (-)
G13762 NA non-coding upstream 1262652 20468246 ~ 20513404 (-)
G13367 NA other downstream 79557 19091239 ~ 19105381 (-)
AMCG00016376 NA other downstream 1643596 17538034 ~ 17541342 (-)
AMCG00016360 aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 other downstream 1918191 17263601 ~ 17266747 (-)
AMCG00016345 NA other downstream 2314936 16866318 ~ 16870002 (-)
G12945 ucp2,ucp2b,LOC106567822 other downstream 2323759 16858541 ~ 16861179 (-)
AMCG00016453 NA other upstream 923314 20128908 ~ 20135547 (-)
AMCG00016479 NA other upstream 1410915 20616509 ~ 20636960 (-)
AMCG00016480 NA other upstream 1460548 20666142 ~ 20683024 (-)
G13962 NA other upstream 4249498 23455092 ~ 23455811 (-)
G13969 NA other upstream 4493555 23699149 ~ 23700255 (-)

Expression


Co-expression Network