AMCG00016419


Basic Information

Item Value
gene id AMCG00016419
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 19277298 ~ 19279668 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016419
ATGATGACCACGTACATGTGGTTGTCTTTGACATGCCTAGCAAACAACTTTCCCAATTCGGCAGCTCGGCTGTACAACAGCACTTTCTTTGAAGGATCCTATGGAGCTGTGGCGAACAGATCGAGTTTCTTCACTTTGGACAACAACACCCTGGCCGATTGGCAGGTCCTCATAGGGAAGAAGAAGTATGGGGCAGAATCCCAAAACCCCACCGTCAAAACTTTGCTGATCGTTGCCTATTCTGTCATCATTGTGATTTCCCTGTTTGGAAATATCCTCGTCTGCCACGTTGTGATCAAAAACAAGAGGATGCATTCCGCTACCAGTTTATTTATCGTGAACCTGGCCATAGCAGACATATTAATAACGCTACTCAACACGCCGTTCACTCTGGTTCGGTTTGTTAACAGTACCTGGGTTTTCGGGAAAGTCATGTGTCACGTCAGCAGGTTCGTTCAATATTGTTCCCTGCATGTGTCCACTCTCACATTGACTGCAATAGCTCTGGACAGACATCAGGTTATTTTGCACCCGTTGAAGCCCAGAATGTCTACAATGCGAGGAGTGATCTATATAGCTGTTATCTGGTTGATGGGGAGCTGTTTCTCTCTACCACATGCCATCTATCAAAAGCTCTTCATGTTTGCATACAGCAAGGACATGCTGCGGAGTTTGTGTGTTCCCAATTTCCCCGAGCCATCAGATCTCTACTGGAAGTACATAGACTTGGCAACGTTCATCCTCCTGTACGTGTTGCCTCTACTCATAATTTCAGTTGCCTACACAACAGTGGCCAAAAGGCTGTGGAGGCGCAATGCGATTGGCGACGTGACGACAGAACAGTACTTCGCCCACcgaagaaagaagaagaagaccaTCAAAATGCTGATGCTGGTAGTGGTAGTGTTCGCCGTCTGCTGGTTCCCCCTGAACTGCTACGTTGTCCTCATATCAAGCCAGACCATCCGCAGCAGCAATGCGCTCTATTTCAGCTTTCACTGGTTTGCTATGAGCAGCACCTGCTACAATCCCTTCATTTACTGCTGGCTGAATGAAAACTTCAGGTCGGAGCTCAAGTACCTGATGAGCATCTGCAAAAAGCCTCAAGGGGTGCAGGAGCATATGTTGCCCTCCACTGCCCCCTGCCACCGCGTGGCCTGGCCAGAGCACCACACGGGCTACAGCAGGGCCAAAGAATCTCACAGCCTCAGGTCTGCCTCCAACATCCACTCTGGGAAGACAGACATTTCATCAGTGGAGCCAATTGTAGCAGTGAGCTAA

Function

GO: NA

KEGG:

id description
K04210 GPR83, GPR72; G protein-coupled receptor 83

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016419 True 1281 mRNA 0.49 4 19277298 19279668

Neighbor

gene id symbol gene type direction distance location
AMCG00016414 NA coding downstream 71704 19184938 ~ 19205594 (-)
AMCG00016410 NA coding downstream 115570 19155334 ~ 19161728 (-)
AMCG00016409 NA coding downstream 133780 19109142 ~ 19143518 (-)
AMCG00016404 NA coding downstream 237794 19025838 ~ 19039504 (-)
AMCG00016403 NA coding downstream 262549 19006083 ~ 19014749 (-)
AMCG00016420 mre11a coding upstream 2034 19281702 ~ 19316677 (-)
AMCG00016418 cwc15,LOC100196400 coding upstream 86416 19366084 ~ 19375596 (-)
AMCG00016424 sesn3 coding upstream 98332 19378000 ~ 19406939 (-)
AMCG00016423 fa76b,fam76b,LOC106603374 coding upstream 147787 19427455 ~ 19437740 (-)
AMCG00016425 mtmr2 coding upstream 166886 19446554 ~ 19455857 (-)
G13414 NA non-coding downstream 18741 19258323 ~ 19258557 (-)
G13413 NA non-coding downstream 20379 19256638 ~ 19256919 (-)
G13392 NA non-coding downstream 23884 19165586 ~ 19253414 (-)
G13366 NA non-coding downstream 188666 19088224 ~ 19088632 (-)
G13341 NA non-coding downstream 199475 19077368 ~ 19077823 (-)
G13615 NA non-coding upstream 723481 20003149 ~ 20004940 (-)
G13680 NA non-coding upstream 1036074 20315742 ~ 20316579 (-)
G13762 NA non-coding upstream 1188578 20468246 ~ 20513404 (-)
G13766 NA non-coding upstream 1207213 20486881 ~ 20492021 (-)
G13789 NA non-coding upstream 1315661 20595329 ~ 20598765 (-)
G13367 NA other downstream 171917 19091239 ~ 19105381 (-)
AMCG00016376 NA other downstream 1735956 17538034 ~ 17541342 (-)
AMCG00016360 aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 other downstream 2010551 17263601 ~ 17266747 (-)
AMCG00016345 NA other downstream 2407296 16866318 ~ 16870002 (-)
G12945 ucp2,ucp2b,LOC106567822 other downstream 2416119 16858541 ~ 16861179 (-)
AMCG00016453 NA other upstream 849240 20128908 ~ 20135547 (-)
AMCG00016479 NA other upstream 1336841 20616509 ~ 20636960 (-)
AMCG00016480 NA other upstream 1386474 20666142 ~ 20683024 (-)
G13962 NA other upstream 4175424 23455092 ~ 23455811 (-)
G13969 NA other upstream 4419481 23699149 ~ 23700255 (-)

Expression


Co-expression Network