AMCG00016446


Basic Information

Item Value
gene id AMCG00016446
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 20071748 ~ 20082592 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016446
ATGGGAATAGTTGCCTTCTGTATTCCCATCCAtccagcagcacagagagatgTGACATCTACCTTAATCGTTCACCCAGAGACCCCTCTAAATGGCAGCACCCTTGGAGCATTTACCCTGGGCCAAGTGGCTACTCTGACCTGGCTATCATTGATCAACCACGGGGCTTTTACTGCCTGTTTGAATGTGGGAATGGGTAGCTCTACATCAAGCAACAATCCCCAGACAACACCAATGGCCCCACTGAACCAAATCGTGTTCAGTCAGGAGCCCAATGGAGTGACCTACAGAGTCCCGGCCCTTATCTACCTGGAGGAAATCGGCACATTCCTGGCCTTCGCAGAGAAACGCTCCTCACCTGCTGATAGTGATGCCAAATACCTGGTGATGAGGAAAGGAAAGATGAACGGTGAATCAGTTCAGtggTCACCCATGCATGAGCTACAGAGTGTATGTCTACCAGGATATCGCACCATGAGTCCCTGCCCTGtgtatgacaaaaacaacaaaacgcTGTTCCTCTTCTTCATCTGCGTTGATAAAACTGAGAATGAGCAAAAGTGTAGTGGGATAAACGCAGCCAAACTGTGTTATGTAACCAGCCAAGACAACGGCAAGACCTGGAGCAATATAACTAATTTGACAGAGAAGGTGATTGGCCAAAGAGAAAAGGATTGGGCGACCTTCGCCGTGGGGCCGGGCCACGGGGTGCAGCTGCAGAGTGGGAGGTTGATTATCCCAGCCTATGCCTACAACATTTGTGGCTGTAAATGTATTGGGAGTTGCTGTCAATGTAAATGCACACCCAGTTCCTGTATAAGCGGATGCACTTGCTATAAATGCGAATGCACTTGCTGTAATCCCACACCATTTGCCTTCTGCATTTATAGAGATGTAGGGCAGGAATGGAAGATGGGAAATCAGATGCCACGGTCACAGTCACTAGAGTGTCAAATGGCAGAGGTTCTTGACCACCAGGGAGGGAAGTATTTGTACTGTAATGCCCGCACTAAGTCAGATTACagggtagaagctgaaagtaaGAACGCAGGTGAAGATTTTGAAGAGAAGAAATCAAAACTAGTGGATGTGAAGAAATCTGGTTGCCAAGGCAGTGTTATTAGCTTCCCTAGGAATGATGGGAATAGTGGGCTTCTGTATTCCCATCCATCCAGCAGCACAGATAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016446 True 1188 mRNA 0.48 3 20071748 20082592

Neighbor

gene id symbol gene type direction distance location
AMCG00016443 NA coding downstream 11583 20043350 ~ 20060165 (-)
AMCG00016442 NA coding downstream 31611 20031431 ~ 20040137 (-)
AMCG00016445 NA coding downstream 40728 20017380 ~ 20031020 (-)
AMCG00016444 NA coding downstream 64037 20005923 ~ 20007711 (-)
AMCG00016440 NA coding downstream 91824 19969592 ~ 19979924 (-)
AMCG00016447 NA coding upstream 62 20082654 ~ 20083255 (-)
AMCG00016452 NA coding upstream 6977 20089569 ~ 20094925 (-)
AMCG00016454 NA coding upstream 63221 20145813 ~ 20146301 (-)
AMCG00016455 ddx10 coding upstream 173044 20255636 ~ 20282317 (-)
AMCG00016463 spcs2,LOC107677086 coding upstream 202730 20285322 ~ 20289785 (-)
G13615 NA non-coding downstream 66808 20003149 ~ 20004940 (-)
G13414 NA non-coding downstream 813191 19258323 ~ 19258557 (-)
G13413 NA non-coding downstream 814829 19256638 ~ 19256919 (-)
G13392 NA non-coding downstream 818334 19165586 ~ 19253414 (-)
G13366 NA non-coding downstream 983116 19088224 ~ 19088632 (-)
G13680 NA non-coding upstream 233150 20315742 ~ 20316579 (-)
G13762 NA non-coding upstream 385654 20468246 ~ 20513404 (-)
G13766 NA non-coding upstream 404289 20486881 ~ 20492021 (-)
G13789 NA non-coding upstream 512737 20595329 ~ 20598765 (-)
G13806 NA non-coding upstream 564244 20646836 ~ 20652268 (-)
G13367 NA other downstream 966367 19091239 ~ 19105381 (-)
AMCG00016376 NA other downstream 2530406 17538034 ~ 17541342 (-)
AMCG00016360 aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 other downstream 2805001 17263601 ~ 17266747 (-)
AMCG00016345 NA other downstream 3201746 16866318 ~ 16870002 (-)
G12945 ucp2,ucp2b,LOC106567822 other downstream 3210569 16858541 ~ 16861179 (-)
AMCG00016453 NA other upstream 46316 20128908 ~ 20135547 (-)
AMCG00016479 NA other upstream 533917 20616509 ~ 20636960 (-)
AMCG00016480 NA other upstream 583550 20666142 ~ 20683024 (-)
G13962 NA other upstream 3372500 23455092 ~ 23455811 (-)
G13969 NA other upstream 3616557 23699149 ~ 23700255 (-)

Expression


Co-expression Network