AMCG00016473 (sat1a.2,sat1,LOC107562204,LOC107591482,LOC107725150,LOC107654323)


Basic Information

Item Value
gene id AMCG00016473
gene name sat1a.2,sat1,LOC107562204,LOC107591482,LOC107725150,LOC107654323
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 20393597 ~ 20398749 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016473
TCTTCAGCCGGCGACGCAGCGAGCCCGTCCTGCATGTAATCTGTTCACACAGGGGTCAGGATCCCAGACTGACTGTGGAGGAAAAACTCCTGGGAAACGAATGAAGAAACACCTCTTGCTTCTCTTCACATACAGAGGACTCGtgagaaaagggaaaaagagtaaaagaagaaaatggccAATTTTATATTACGGAAAGCGGAACCCAGTGACGTGTCGGACATACTGCGCCTCATAAAGgaaCTGGCTAAATTCGAAGAAATGGAAGATCAAGTGAGATTGACAGAGAAAGAGCTGCTGGAGGATGGCTTCGGGGATCACCCTTTCTACCACTGCGTGGTGGCAGAAGTGCCCAAGGACAAGCAGTCCGCCGAGGGTTACACCGTCGTAGGATTTGCCATGTACTACTTCACCTATGACCCCTGGATTGGAAAACTGCTGTACCTGGAAGACTTCTACGTAATGAAGGAATTCAGAGGATACGGAATCGGGTCCGAAATCTTGAAGAACCTGAGTCATACGGCCGTGAAGACGCGGTGTAGCGGTATGCACTTCATCGTGGCCGAGTGGAACAAGCCGTCCATCGAGTTCTACAAGCGGCGCGGCGCCTCCGACCTCTCTCTGGAGGAGGGCTGGCGGCTCTTCGAGATCGACAAGGAGTACCTGCTCAAGATGTCCGCCAAGTAGAGTGCCTGACGGGAGCAGTCTGACACACCTGTGGCTTtcggtttttttgttttttgttttgttttgttaaaatgtaatttaactttCATAATTAAGAAGTTGTGATAGTACTGTAtgcctgctttaaaaaaacaactgatttGATGtatactaatacaaaaataaaagctattACAATTAATGCTGTTGGGACCTTTGACTCATGTTACCTAGCCCAGGGTTTAATATAACGTGATGAAACGGTTATTGAACCAATCCTGTATTTGGTAGACCTCCAGCGtggattttttcttttgcagggTTTTAGAAAATTGTTAGAAAGGCCTGAGAGAGTGAACCCTCTGCTCTAGGCTCCCAGGTCAGGGCTCTTAAtcatactgatacacacatgTAGGAATTGAGCTGGTGGGTTTGATTAAATCGCAAAGAATGACATATCCTTGCTCCTATGGTCATGTCAACATCGTGTGAGGAACTGAGTCATGCCAGGAATGTGCCGGGCGAGAACCAAGCGTTTCTGGTTCGTTCTGGCCGTGAGCATCAGAGCACAGCGGGGCATTGCTCACTCGCAGGTTCTCGGGTTCCTGTTTGAACAGAAATTCAGCGGCAGTCTCGTGACTCTCAAGGAACTAGTTCATTCTGGGATTACAGACTCGGTTCATGAATACCACTTCCTTCCTCACATTCTGGCAATGAGAAGTGCTGTGATGGATTTCCCGTGTCATTGTTACAGTTGGCTTTTATAGAGGGGGGAGGGTGGCAGATCAGACACAACCGAGTCATTCTGACCTTATTACTGATTACTGTACTTGTCATGTACCATGCAACATGATGTGCAGTACCTTTAGAGTAGTTTAggaagatttttcttttctttaaatatcttCTTCCTTTTTGCTATACAAAGAATCTGTTCCTTTTTTCCTCATGATTTCCAAAACTGCAGATAGCCGAGAGCAAGCGATCAGTCCTGTGTCACAGAAACGCACAAAGTGGTTTGTGTACACAGACAGAAAAGGTTAATGCACTCAGTTGTCTAGAGCAGggttttgcaaacatttttcacTCATCCACGAACAAAACGCATcagcatacatatatacagctctgggaaaacttaagagaccactgcaaatttttcttaaat

Function

symbol description
sat1a.2 Enables diamine N-acetyltransferase activity. Predicted to be involved in spermidine acetylation. Is expressed in several structures, including digestive system; eye; gill; heart; and pleuroperitoneal region. Orthologous to human SAT1 (spermidine/spermine N1-acetyltransferase 1).
sat1 Enables diamine N-acetyltransferase activity and identical protein binding activity. Involved in angiogenesis; polyamine biosynthetic process; and spermidine acetylation. Predicted to be integral component of membrane. Predicted to be active in cytosol.

NR:

description
PREDICTED: diamine acetyltransferase 1-like

GO:

id name namespace
GO:0004145 diamine N-acetyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016473 True 1834 mRNA 0.45 6 20393597 20398749

Neighbor

gene id symbol gene type direction distance location
AMCG00016460 kif3a coding downstream 14465 20372554 ~ 20379132 (-)
AMCG00016464 NA coding downstream 31387 20357233 ~ 20362210 (-)
AMCG00016461 eif2s3,if2g,LOC106590489,LOC107727229,LOC107686712 coding downstream 38473 20342080 ~ 20355124 (-)
AMCG00016459 NA coding downstream 54554 20334888 ~ 20339043 (-)
AMCG00016462 kpna1,LOC102776202 coding downstream 90523 20292302 ~ 20303074 (-)
AMCG00016472 sat1a.1,sat1,LOC107654323,LOC107734365,LOC107665519,LOC107591481,LOC107725087 coding upstream 2639 20401388 ~ 20405776 (-)
AMCG00016470 prdx4,prdx2 coding upstream 23205 20421954 ~ 20425750 (-)
AMCG00016471 NA coding upstream 42796 20441545 ~ 20447031 (-)
AMCG00016477 NA coding upstream 108099 20506848 ~ 20510468 (-)
AMCG00016476 NA coding upstream 119050 20517799 ~ 20523757 (-)
G13680 NA non-coding downstream 77018 20315742 ~ 20316579 (-)
G13615 NA non-coding downstream 388657 20003149 ~ 20004940 (-)
G13414 NA non-coding downstream 1135040 19258323 ~ 19258557 (-)
G13413 NA non-coding downstream 1136678 19256638 ~ 19256919 (-)
G13392 NA non-coding downstream 1140183 19165586 ~ 19253414 (-)
G13762 NA non-coding upstream 69497 20468246 ~ 20513404 (-)
G13766 NA non-coding upstream 88132 20486881 ~ 20492021 (-)
G13789 NA non-coding upstream 196580 20595329 ~ 20598765 (-)
G13806 NA non-coding upstream 248087 20646836 ~ 20652268 (-)
G13812 NA non-coding upstream 362674 20761423 ~ 20761693 (-)
AMCG00016453 NA other downstream 258050 20128908 ~ 20135547 (-)
G13367 NA other downstream 1288216 19091239 ~ 19105381 (-)
AMCG00016376 NA other downstream 2852255 17538034 ~ 17541342 (-)
AMCG00016360 aamdc,LOC107658908,LOC107660681,LOC107600345,LOC107600309 other downstream 3126850 17263601 ~ 17266747 (-)
AMCG00016345 NA other downstream 3523595 16866318 ~ 16870002 (-)
AMCG00016479 NA other upstream 217760 20616509 ~ 20636960 (-)
AMCG00016480 NA other upstream 267393 20666142 ~ 20683024 (-)
G13962 NA other upstream 3056343 23455092 ~ 23455811 (-)
G13969 NA other upstream 3300400 23699149 ~ 23700255 (-)
AMCG00016504 NA other upstream 3442313 23841062 ~ 23862739 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000171_00822608_00823794 SAT1A.2 coding CI01000171 null 822412 ~ 824057 (+)
rainbow trout (Oncorhynchus mykiss) G948565 LOC106579466 non-coding NC_048575.1 CM023229.2 16405167 ~ 16408397 (+)