AMCG00016487


Basic Information

Item Value
gene id AMCG00016487
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 22017124 ~ 22020731 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016487
GTGTATTGTCTTTTCTTGGTAATGCAGCGCTGATTATCACTATTAAAACAGGCAGCAGTTTGCACTCTCccatgtatgtattaatatgtatgaATGCCTGTGTAGACCTGACTTTGCCAATAATATTCGTACCAAAAATGTTattaagttttttatttaacttgagTGGAATAACTCTGTTGGGTTGtctcattcaaatgttttttatccACTTCATTGGTAGTTTTCAGTCAACTGTTCTCCTAGGGATGGCTCTGGATCGCTATGTTGCCATATGTATCCCACTGCGCTACAATGATTACATAAATACGTCGACTTTCTGTAAATTCTCTGCTGTAGTTATTTTGagaaatttattttttgttttacttatagTAGTTCTAGCCAGTCCTCTATCTTTTTGCTCATCGAATGTTATTGATGATTGCTTTTGTCAGCACATGGCTCTTGTAAGCTTGGCCTGTGGAAACACCTCCAAGAACAGTATTATTGGGCTGCttgcaatatttttaataattgtcaCTGATGCTGTGCTCATTGTGATTTCATACATGAAAATTttctttgatgtttttaaaacacactcaGGAAAATCCCGTGAGAAAGCAATCCACACCTGTGGAACTCATTTAATAGTCACAGGGGTGTCTTTCACCTTTAACATGTTTGCATTACTTTCATACAGATTCAAAAATTCTCTCCCTCCTAATATTCATAACTTAATAAGCATAATGTACTTACTTTTCCCGAGCACTCTCCACCCTATTATTTATGGAATAAGAACAAAAGCAATAAGAGGGCAGATGCTGAAACTATTTCAATGCACAACAATTGGACCCATCTCCACAAAAGTATCGAATAACAGTGCTATTTCAGCAGAGGTGAAAATGCAGCAAAATCAAAGTGGAATTACATCTCATACAGAATTTCTACTACTTGGATTTCATGGACTCGGAGAATTCAGACGactgctttttcttcctttttctctgATGTTTGTATTGGCTTTTGTTGGTAATGCAGCACTGATAATCACTATTAAAACAGGCAGCAGTTTACACTCTCCCATGTATGTGTTAATATGTATCAATGCCTGTGTAGACCTGACATTGCTAATTACATTTGTCCCGAAAATGTTATTAAGCTTTTTATTTGACTGGAATGGAATAACTCTATTGGGTTGTCTcatccaaatgttttttgtccacTTTGTTGGTAGCTTTCAGTCAACTCTACTGTTAGGGATGGCTCTGGATCGTTATGTTGCCATATGCATCCCACTGCGCTACAATGATTACATACAT

Function

GO:

id name namespace
GO:0050896 response to stimulus biological_process
GO:0016020 membrane cellular_component
GO:0004871 obsolete signal transducer activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016487 True 1304 mRNA 0.36 2 22017124 22020731

Neighbor

gene id symbol gene type direction distance location
AMCG00016488 NA coding downstream 64931 21949268 ~ 21952193 (-)
AMCG00016486 NA coding downstream 95485 21910870 ~ 21921639 (-)
AMCG00016485 igsf11 coding downstream 307435 21688811 ~ 21709689 (-)
AMCG00016484 NA coding downstream 771706 21074094 ~ 21245418 (-)
AMCG00016483 NA coding downstream 1004763 20986992 ~ 21012361 (-)
AMCG00016497 NA coding upstream 56886 22077617 ~ 22085342 (-)
AMCG00016512 NA coding upstream 1872692 23893423 ~ 23902805 (-)
AMCG00016510 NA coding upstream 1896212 23916943 ~ 23925716 (-)
AMCG00016514 NA coding upstream 1907160 23927891 ~ 23931580 (-)
AMCG00016513 NA coding upstream 1914172 23934903 ~ 23937234 (-)
G13861 NA non-coding downstream 231408 21785244 ~ 21785716 (-)
G13860 NA non-coding downstream 234828 21782064 ~ 21782296 (-)
G13819 NA non-coding downstream 1109006 20907918 ~ 20908118 (-)
G13812 NA non-coding downstream 1255431 20761423 ~ 20761693 (-)
G13806 NA non-coding downstream 1364856 20646836 ~ 20652268 (-)
G13884 NA non-coding upstream 121222 22141953 ~ 22142185 (-)
G13887 NA non-coding upstream 151819 22172550 ~ 22172940 (-)
G13891 NA non-coding upstream 169185 22189916 ~ 22226828 (-)
G13893 NA non-coding upstream 215440 22236171 ~ 22236399 (-)
G13895 NA non-coding upstream 339783 22360514 ~ 22360776 (-)
AMCG00016480 NA other downstream 1334100 20666142 ~ 20683024 (-)
AMCG00016479 NA other downstream 1380164 20616509 ~ 20636960 (-)
AMCG00016453 NA other downstream 1881577 20128908 ~ 20135547 (-)
G13367 NA other downstream 2911743 19091239 ~ 19105381 (-)
AMCG00016376 NA other downstream 4475782 17538034 ~ 17541342 (-)
G13962 NA other upstream 1434361 23455092 ~ 23455811 (-)
G13969 NA other upstream 1678418 23699149 ~ 23700255 (-)
AMCG00016504 NA other upstream 1820331 23841062 ~ 23862739 (-)
AMCG00016505 NA other upstream 1843850 23864581 ~ 23885258 (-)
AMCG00016531 NA other upstream 2288525 24309256 ~ 24323458 (-)

Expression


Co-expression Network