Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00016488 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030122.1 |
| NCBI id | CM030122.1 |
| chromosome length | 54868152 |
| location | 21949268 ~ 21952193 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0007608 | sensory perception of smell | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| GO:0004984 | olfactory receptor activity | molecular_function |
| id | description |
|---|---|
| K04257 | OLFR; olfactory receptor |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00016488 | True | 1203 | mRNA | 0.40 | 2 | 21949268 | 21952193 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00016486 | NA | coding | downstream | 27629 | 21910870 ~ 21921639 (-) |
| AMCG00016485 | igsf11 | coding | downstream | 239579 | 21688811 ~ 21709689 (-) |
| AMCG00016484 | NA | coding | downstream | 703850 | 21074094 ~ 21245418 (-) |
| AMCG00016483 | NA | coding | downstream | 936907 | 20986992 ~ 21012361 (-) |
| AMCG00016481 | NA | coding | downstream | 976058 | 20923980 ~ 20973210 (-) |
| AMCG00016487 | NA | coding | upstream | 64931 | 22017124 ~ 22020731 (-) |
| AMCG00016497 | NA | coding | upstream | 125424 | 22077617 ~ 22085342 (-) |
| AMCG00016512 | NA | coding | upstream | 1941230 | 23893423 ~ 23902805 (-) |
| AMCG00016510 | NA | coding | upstream | 1964750 | 23916943 ~ 23925716 (-) |
| AMCG00016514 | NA | coding | upstream | 1975698 | 23927891 ~ 23931580 (-) |
| G13861 | NA | non-coding | downstream | 163552 | 21785244 ~ 21785716 (-) |
| G13860 | NA | non-coding | downstream | 166972 | 21782064 ~ 21782296 (-) |
| G13819 | NA | non-coding | downstream | 1041150 | 20907918 ~ 20908118 (-) |
| G13812 | NA | non-coding | downstream | 1187575 | 20761423 ~ 20761693 (-) |
| G13806 | NA | non-coding | downstream | 1297000 | 20646836 ~ 20652268 (-) |
| G13884 | NA | non-coding | upstream | 189760 | 22141953 ~ 22142185 (-) |
| G13887 | NA | non-coding | upstream | 220357 | 22172550 ~ 22172940 (-) |
| G13891 | NA | non-coding | upstream | 237723 | 22189916 ~ 22226828 (-) |
| G13893 | NA | non-coding | upstream | 283978 | 22236171 ~ 22236399 (-) |
| G13895 | NA | non-coding | upstream | 408321 | 22360514 ~ 22360776 (-) |
| AMCG00016480 | NA | other | downstream | 1266244 | 20666142 ~ 20683024 (-) |
| AMCG00016479 | NA | other | downstream | 1312308 | 20616509 ~ 20636960 (-) |
| AMCG00016453 | NA | other | downstream | 1813721 | 20128908 ~ 20135547 (-) |
| G13367 | NA | other | downstream | 2843887 | 19091239 ~ 19105381 (-) |
| AMCG00016376 | NA | other | downstream | 4407926 | 17538034 ~ 17541342 (-) |
| G13962 | NA | other | upstream | 1502899 | 23455092 ~ 23455811 (-) |
| G13969 | NA | other | upstream | 1746956 | 23699149 ~ 23700255 (-) |
| AMCG00016504 | NA | other | upstream | 1888869 | 23841062 ~ 23862739 (-) |
| AMCG00016505 | NA | other | upstream | 1912388 | 23864581 ~ 23885258 (-) |
| AMCG00016531 | NA | other | upstream | 2357063 | 24309256 ~ 24323458 (-) |
