AMCG00016497


Basic Information

Item Value
gene id AMCG00016497
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030122.1
NCBI id CM030122.1
chromosome length 54868152
location 22077617 ~ 22085342 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00016497
atgcaacaaaatcaaaaaggaaatacatCTCACACAGAATTTCTTCTGCTTGGATTTCAGGGACTTGGAGAATACAGAAGATATCTTAGCATTCCTTTCTTTCTGATAGGGGTATTGTCTTTTGCTGGTAATGCACTACTCatattcacaattaaaacaagaaatagttTGCACTCTCCCATGTATGTGTTAATATGTATGAATGCCTGTGTAGACCTGACTTTGCCAATAATTTTTGCCCCGAAAATGTTATTAAGCTTTTTATTTGACTGGAATGGAATAACTCTATTGGGTTGTCTTGTCCAAATGTTTTTTATCCACTTTGTGAGCTCCTTTCAGTCAACTGTTCTCCTAGGGATGGCTTTGGATCGATATGTTGCCATATGTGTCCCACTGCGCTACAATGATTACATAAATATGTCGACTTTCTGTAAATTCTCTGCTGTAGTTCTTctgagaaatatgttttttgttttacttgtagTAGTTCTAGCCAGTCGTCTTTCTTTTTGCTCATCGAATGTTATTGATGATTGCTTTTGTGAGCACATGGCTCTGGTAAGCTTGGCCTGTGGAAACACCACCAAGAACAGTATTATTGGGCTGCTTGGTGTGTTTTCTGTAACAGTCACTGATGCTGTGATCTTTGTGATTTCCTACATCAAAGTTTtctctgatgtttttaaaacacattcaggAAAATCACGTGAAAAAACAATCCACACATGTGGAACTCATTTAATAATCGCAGGTGTGACTTTGACCTTTACCATGACCACACTTCTTGCATACAGGTTCCAAAATTCCCTCCCTCCCAATATTCATAACTTAATCAGTGTAATATACTTACTTTTGCCCACCATTTTACATCCAATTATTTATGGAATAAgaacaaaagcaataaaagaGGAGATGTGGAAACATTTccaatgcaaaataattggacCCATCTCCTTGAAACTATCAATCACTGATATCGTGGTCATTGTAATTTCATATATCAAAATTTtctctgatgtttttaaaacacactcaGGAAACTCCCGACAGAAGGCAAGCCACACATGTGGAACTCAATTAATAGTCACAGGTGTGTCTTACACTTTTGCCATGACAGCCTTTCTTGCATACCGGATCAAGAATTCACTCAACCCCGGTATTCACACCCTAATAAGCATAATATCACAGTGGTATTTAAGCAGAGAGGTTTTAAGCTTTTTATTTGACTGGGATGGAATAACTCTATTGGGAGGTctcatacaaatgttttttatccACTTTGTTAGTAGATTTCAGTCAACTCTACTGCTAGGGATGGCTCTGGATCAGGGTCACAATGGGGACAATTAG

Function

GO:

id name namespace
GO:0050896 response to stimulus biological_process
GO:0016020 membrane cellular_component
GO:0004871 obsolete signal transducer activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00016497 True 1350 mRNA 0.37 3 22077617 22085342

Neighbor

gene id symbol gene type direction distance location
AMCG00016487 NA coding downstream 56886 22017124 ~ 22020731 (-)
AMCG00016488 NA coding downstream 125424 21949268 ~ 21952193 (-)
AMCG00016486 NA coding downstream 155978 21910870 ~ 21921639 (-)
AMCG00016485 igsf11 coding downstream 367928 21688811 ~ 21709689 (-)
AMCG00016484 NA coding downstream 832199 21074094 ~ 21245418 (-)
AMCG00016512 NA coding upstream 1808081 23893423 ~ 23902805 (-)
AMCG00016510 NA coding upstream 1831601 23916943 ~ 23925716 (-)
AMCG00016514 NA coding upstream 1842549 23927891 ~ 23931580 (-)
AMCG00016513 NA coding upstream 1849561 23934903 ~ 23937234 (-)
AMCG00016511 NA coding upstream 1859852 23945194 ~ 23951329 (-)
G13861 NA non-coding downstream 291901 21785244 ~ 21785716 (-)
G13860 NA non-coding downstream 295321 21782064 ~ 21782296 (-)
G13819 NA non-coding downstream 1169499 20907918 ~ 20908118 (-)
G13812 NA non-coding downstream 1315924 20761423 ~ 20761693 (-)
G13806 NA non-coding downstream 1425349 20646836 ~ 20652268 (-)
G13884 NA non-coding upstream 56611 22141953 ~ 22142185 (-)
G13887 NA non-coding upstream 87208 22172550 ~ 22172940 (-)
G13891 NA non-coding upstream 104574 22189916 ~ 22226828 (-)
G13893 NA non-coding upstream 150829 22236171 ~ 22236399 (-)
G13895 NA non-coding upstream 275172 22360514 ~ 22360776 (-)
AMCG00016480 NA other downstream 1394593 20666142 ~ 20683024 (-)
AMCG00016479 NA other downstream 1440657 20616509 ~ 20636960 (-)
AMCG00016453 NA other downstream 1942070 20128908 ~ 20135547 (-)
G13367 NA other downstream 2972236 19091239 ~ 19105381 (-)
AMCG00016376 NA other downstream 4536275 17538034 ~ 17541342 (-)
G13962 NA other upstream 1369750 23455092 ~ 23455811 (-)
G13969 NA other upstream 1613807 23699149 ~ 23700255 (-)
AMCG00016504 NA other upstream 1755720 23841062 ~ 23862739 (-)
AMCG00016505 NA other upstream 1779239 23864581 ~ 23885258 (-)
AMCG00016531 NA other upstream 2223914 24309256 ~ 24323458 (-)

Expression


Co-expression Network